Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25563 | 76912;76913;76914 | chr2:178569445;178569444;178569443 | chr2:179434172;179434171;179434170 |
N2AB | 23922 | 71989;71990;71991 | chr2:178569445;178569444;178569443 | chr2:179434172;179434171;179434170 |
N2A | 22995 | 69208;69209;69210 | chr2:178569445;178569444;178569443 | chr2:179434172;179434171;179434170 |
N2B | 16498 | 49717;49718;49719 | chr2:178569445;178569444;178569443 | chr2:179434172;179434171;179434170 |
Novex-1 | 16623 | 50092;50093;50094 | chr2:178569445;178569444;178569443 | chr2:179434172;179434171;179434170 |
Novex-2 | 16690 | 50293;50294;50295 | chr2:178569445;178569444;178569443 | chr2:179434172;179434171;179434170 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/Y | rs1273963065 | -0.242 | 0.219 | N | 0.178 | 0.188 | 0.404453528171 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
F/Y | rs1273963065 | -0.242 | 0.219 | N | 0.178 | 0.188 | 0.404453528171 | gnomAD-4.0.0 | 4.77775E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58079E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8747 | likely_pathogenic | 0.8589 | pathogenic | -2.229 | Highly Destabilizing | 0.993 | D | 0.511 | neutral | None | None | None | None | N |
F/C | 0.4922 | ambiguous | 0.4509 | ambiguous | -1.341 | Destabilizing | 1.0 | D | 0.651 | neutral | N | 0.513721635 | None | None | N |
F/D | 0.9697 | likely_pathogenic | 0.9637 | pathogenic | -0.956 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
F/E | 0.9768 | likely_pathogenic | 0.972 | pathogenic | -0.836 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
F/G | 0.9418 | likely_pathogenic | 0.9367 | pathogenic | -2.59 | Highly Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
F/H | 0.7152 | likely_pathogenic | 0.664 | pathogenic | -0.96 | Destabilizing | 0.996 | D | 0.575 | neutral | None | None | None | None | N |
F/I | 0.6741 | likely_pathogenic | 0.6279 | pathogenic | -1.126 | Destabilizing | 0.99 | D | 0.43 | neutral | N | 0.474587244 | None | None | N |
F/K | 0.9693 | likely_pathogenic | 0.965 | pathogenic | -1.105 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | N |
F/L | 0.9665 | likely_pathogenic | 0.96 | pathogenic | -1.126 | Destabilizing | 0.953 | D | 0.459 | neutral | N | 0.470104144 | None | None | N |
F/M | 0.7975 | likely_pathogenic | 0.7803 | pathogenic | -0.939 | Destabilizing | 0.999 | D | 0.492 | neutral | None | None | None | None | N |
F/N | 0.8772 | likely_pathogenic | 0.8528 | pathogenic | -1.169 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
F/P | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -1.49 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
F/Q | 0.9337 | likely_pathogenic | 0.9242 | pathogenic | -1.227 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
F/R | 0.9239 | likely_pathogenic | 0.918 | pathogenic | -0.546 | Destabilizing | 0.998 | D | 0.67 | neutral | None | None | None | None | N |
F/S | 0.7065 | likely_pathogenic | 0.6744 | pathogenic | -2.062 | Highly Destabilizing | 0.997 | D | 0.581 | neutral | N | 0.435490138 | None | None | N |
F/T | 0.8619 | likely_pathogenic | 0.8312 | pathogenic | -1.845 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
F/V | 0.5835 | likely_pathogenic | 0.5428 | ambiguous | -1.49 | Destabilizing | 0.98 | D | 0.44 | neutral | N | 0.477646192 | None | None | N |
F/W | 0.6175 | likely_pathogenic | 0.6175 | pathogenic | -0.303 | Destabilizing | 0.999 | D | 0.499 | neutral | None | None | None | None | N |
F/Y | 0.1028 | likely_benign | 0.1044 | benign | -0.499 | Destabilizing | 0.219 | N | 0.178 | neutral | N | 0.408498325 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.