Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25568 | 76927;76928;76929 | chr2:178569430;178569429;178569428 | chr2:179434157;179434156;179434155 |
N2AB | 23927 | 72004;72005;72006 | chr2:178569430;178569429;178569428 | chr2:179434157;179434156;179434155 |
N2A | 23000 | 69223;69224;69225 | chr2:178569430;178569429;178569428 | chr2:179434157;179434156;179434155 |
N2B | 16503 | 49732;49733;49734 | chr2:178569430;178569429;178569428 | chr2:179434157;179434156;179434155 |
Novex-1 | 16628 | 50107;50108;50109 | chr2:178569430;178569429;178569428 | chr2:179434157;179434156;179434155 |
Novex-2 | 16695 | 50308;50309;50310 | chr2:178569430;178569429;178569428 | chr2:179434157;179434156;179434155 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.994 | N | 0.855 | 0.778 | 0.87689326119 | gnomAD-4.0.0 | 1.36885E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79927E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6318 | likely_pathogenic | 0.6497 | pathogenic | -2.45 | Highly Destabilizing | 0.916 | D | 0.688 | prob.neutral | None | None | None | None | N |
L/C | 0.7037 | likely_pathogenic | 0.7296 | pathogenic | -1.826 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
L/D | 0.9803 | likely_pathogenic | 0.9818 | pathogenic | -2.59 | Highly Destabilizing | 0.996 | D | 0.848 | deleterious | None | None | None | None | N |
L/E | 0.8787 | likely_pathogenic | 0.8861 | pathogenic | -2.486 | Highly Destabilizing | 0.996 | D | 0.859 | deleterious | None | None | None | None | N |
L/F | 0.299 | likely_benign | 0.3065 | benign | -1.584 | Destabilizing | 0.967 | D | 0.733 | prob.delet. | N | 0.484903025 | None | None | N |
L/G | 0.9456 | likely_pathogenic | 0.9503 | pathogenic | -2.891 | Highly Destabilizing | 0.987 | D | 0.861 | deleterious | None | None | None | None | N |
L/H | 0.7379 | likely_pathogenic | 0.7449 | pathogenic | -2.15 | Highly Destabilizing | 0.999 | D | 0.835 | deleterious | N | 0.495206345 | None | None | N |
L/I | 0.0824 | likely_benign | 0.0797 | benign | -1.229 | Destabilizing | 0.011 | N | 0.294 | neutral | N | 0.316648877 | None | None | N |
L/K | 0.8431 | likely_pathogenic | 0.8468 | pathogenic | -1.935 | Destabilizing | 0.987 | D | 0.847 | deleterious | None | None | None | None | N |
L/M | 0.147 | likely_benign | 0.1498 | benign | -1.097 | Destabilizing | 0.975 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/N | 0.8993 | likely_pathogenic | 0.9011 | pathogenic | -1.982 | Destabilizing | 0.996 | D | 0.854 | deleterious | None | None | None | None | N |
L/P | 0.9815 | likely_pathogenic | 0.9821 | pathogenic | -1.612 | Destabilizing | 0.994 | D | 0.855 | deleterious | N | 0.495206345 | None | None | N |
L/Q | 0.671 | likely_pathogenic | 0.6873 | pathogenic | -2.06 | Highly Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
L/R | 0.7672 | likely_pathogenic | 0.7813 | pathogenic | -1.367 | Destabilizing | 0.994 | D | 0.833 | deleterious | N | 0.495206345 | None | None | N |
L/S | 0.8039 | likely_pathogenic | 0.8117 | pathogenic | -2.64 | Highly Destabilizing | 0.987 | D | 0.839 | deleterious | None | None | None | None | N |
L/T | 0.5711 | likely_pathogenic | 0.5952 | pathogenic | -2.412 | Highly Destabilizing | 0.975 | D | 0.77 | deleterious | None | None | None | None | N |
L/V | 0.1041 | likely_benign | 0.1069 | benign | -1.612 | Destabilizing | 0.369 | N | 0.503 | neutral | N | 0.409557117 | None | None | N |
L/W | 0.6674 | likely_pathogenic | 0.6886 | pathogenic | -1.816 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
L/Y | 0.737 | likely_pathogenic | 0.759 | pathogenic | -1.602 | Destabilizing | 0.987 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.