Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25569 | 76930;76931;76932 | chr2:178569427;178569426;178569425 | chr2:179434154;179434153;179434152 |
N2AB | 23928 | 72007;72008;72009 | chr2:178569427;178569426;178569425 | chr2:179434154;179434153;179434152 |
N2A | 23001 | 69226;69227;69228 | chr2:178569427;178569426;178569425 | chr2:179434154;179434153;179434152 |
N2B | 16504 | 49735;49736;49737 | chr2:178569427;178569426;178569425 | chr2:179434154;179434153;179434152 |
Novex-1 | 16629 | 50110;50111;50112 | chr2:178569427;178569426;178569425 | chr2:179434154;179434153;179434152 |
Novex-2 | 16696 | 50311;50312;50313 | chr2:178569427;178569426;178569425 | chr2:179434154;179434153;179434152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1002726225 | None | 0.001 | N | 0.178 | 0.055 | 0.165133752707 | gnomAD-4.0.0 | 2.73767E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59851E-06 | 0 | 0 |
D/H | None | None | 0.879 | N | 0.479 | 0.442 | 0.336400405673 | gnomAD-4.0.0 | 1.5924E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2877 | likely_benign | 0.2874 | benign | -0.443 | Destabilizing | 0.338 | N | 0.507 | neutral | N | 0.49836818 | None | None | I |
D/C | 0.7386 | likely_pathogenic | 0.7441 | pathogenic | 0.096 | Stabilizing | 0.991 | D | 0.615 | neutral | None | None | None | None | I |
D/E | 0.1385 | likely_benign | 0.1337 | benign | -0.379 | Destabilizing | 0.001 | N | 0.178 | neutral | N | 0.428084163 | None | None | I |
D/F | 0.8037 | likely_pathogenic | 0.8108 | pathogenic | -0.412 | Destabilizing | 0.967 | D | 0.56 | neutral | None | None | None | None | I |
D/G | 0.2206 | likely_benign | 0.2201 | benign | -0.675 | Destabilizing | 0.505 | D | 0.468 | neutral | N | 0.48988477 | None | None | I |
D/H | 0.4407 | ambiguous | 0.4372 | ambiguous | -0.54 | Destabilizing | 0.879 | D | 0.479 | neutral | N | 0.519340885 | None | None | I |
D/I | 0.6116 | likely_pathogenic | 0.6121 | pathogenic | 0.131 | Stabilizing | 0.906 | D | 0.557 | neutral | None | None | None | None | I |
D/K | 0.5431 | ambiguous | 0.534 | ambiguous | 0.298 | Stabilizing | 0.404 | N | 0.473 | neutral | None | None | None | None | I |
D/L | 0.5558 | ambiguous | 0.5628 | ambiguous | 0.131 | Stabilizing | 0.826 | D | 0.493 | neutral | None | None | None | None | I |
D/M | 0.7723 | likely_pathogenic | 0.7765 | pathogenic | 0.473 | Stabilizing | 0.991 | D | 0.563 | neutral | None | None | None | None | I |
D/N | 0.1544 | likely_benign | 0.148 | benign | -0.031 | Destabilizing | 0.505 | D | 0.455 | neutral | N | 0.501139127 | None | None | I |
D/P | 0.6197 | likely_pathogenic | 0.607 | pathogenic | -0.038 | Destabilizing | 0.004 | N | 0.264 | neutral | None | None | None | None | I |
D/Q | 0.402 | ambiguous | 0.4073 | ambiguous | -0.005 | Destabilizing | 0.404 | N | 0.402 | neutral | None | None | None | None | I |
D/R | 0.5973 | likely_pathogenic | 0.5984 | pathogenic | 0.322 | Stabilizing | 0.826 | D | 0.501 | neutral | None | None | None | None | I |
D/S | 0.1925 | likely_benign | 0.1925 | benign | -0.175 | Destabilizing | 0.404 | N | 0.44 | neutral | None | None | None | None | I |
D/T | 0.3739 | ambiguous | 0.3764 | ambiguous | 0.012 | Stabilizing | 0.575 | D | 0.465 | neutral | None | None | None | None | I |
D/V | 0.3776 | ambiguous | 0.3808 | ambiguous | -0.038 | Destabilizing | 0.782 | D | 0.469 | neutral | N | 0.511164119 | None | None | I |
D/W | 0.9402 | likely_pathogenic | 0.9424 | pathogenic | -0.259 | Destabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | I |
D/Y | 0.4048 | ambiguous | 0.4096 | ambiguous | -0.159 | Destabilizing | 0.957 | D | 0.565 | neutral | N | 0.512606914 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.