Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25580 | 76963;76964;76965 | chr2:178569394;178569393;178569392 | chr2:179434121;179434120;179434119 |
N2AB | 23939 | 72040;72041;72042 | chr2:178569394;178569393;178569392 | chr2:179434121;179434120;179434119 |
N2A | 23012 | 69259;69260;69261 | chr2:178569394;178569393;178569392 | chr2:179434121;179434120;179434119 |
N2B | 16515 | 49768;49769;49770 | chr2:178569394;178569393;178569392 | chr2:179434121;179434120;179434119 |
Novex-1 | 16640 | 50143;50144;50145 | chr2:178569394;178569393;178569392 | chr2:179434121;179434120;179434119 |
Novex-2 | 16707 | 50344;50345;50346 | chr2:178569394;178569393;178569392 | chr2:179434121;179434120;179434119 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs371711135 | -1.426 | 0.892 | N | 0.478 | 0.248 | None | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 2.05719E-04 | None | 0 | None | 0 | 0 | 0 |
T/A | rs371711135 | -1.426 | 0.892 | N | 0.478 | 0.248 | None | gnomAD-3.1.2 | 9.86E-05 | None | None | None | None | N | None | 1.93097E-04 | 6.56E-05 | 0 | 0 | 7.73395E-04 | None | 0 | 0 | 0 | 0 | 9.56023E-04 |
T/A | rs371711135 | -1.426 | 0.892 | N | 0.478 | 0.248 | None | gnomAD-4.0.0 | 1.6736E-05 | None | None | None | None | N | None | 2.00342E-04 | 1.66822E-05 | None | 0 | 1.33875E-04 | None | 0 | 0 | 0 | 0 | 8.00769E-05 |
T/K | rs56372592 | -0.29 | 0.993 | N | 0.644 | 0.324 | None | gnomAD-2.1.1 | 2.11159E-04 | None | None | None | None | N | None | 1.24131E-04 | 8.5E-05 | None | 0 | 0 | None | 0 | None | 4E-05 | 3.84259E-04 | 4.21941E-04 |
T/K | rs56372592 | -0.29 | 0.993 | N | 0.644 | 0.324 | None | gnomAD-3.1.2 | 2.36774E-04 | None | None | None | None | N | None | 9.66E-05 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 4.26496E-04 | 0 | 9.56938E-04 |
T/K | rs56372592 | -0.29 | 0.993 | N | 0.644 | 0.324 | None | gnomAD-4.0.0 | 6.51499E-04 | None | None | None | None | N | None | 8.01518E-05 | 1.5018E-04 | None | 3.38021E-05 | 0 | None | 3.1252E-05 | 0 | 8.49471E-04 | 0 | 4.96524E-04 |
T/M | rs56372592 | -0.241 | 0.998 | N | 0.664 | 0.36 | None | gnomAD-2.1.1 | 1.61769E-03 | None | None | None | None | N | None | 6.62032E-04 | 1.41659E-04 | None | 0 | 2.0426E-02 | None | 2.28953E-04 | None | 0 | 1.56841E-04 | 9.84529E-04 |
T/M | rs56372592 | -0.241 | 0.998 | N | 0.664 | 0.36 | None | gnomAD-3.1.2 | 9.3394E-04 | None | None | None | None | N | None | 5.31144E-04 | 4.59559E-04 | 0 | 0 | 1.95433E-02 | None | 0 | 0 | 8.82E-05 | 2.06782E-04 | 2.39234E-03 |
T/M | rs56372592 | -0.241 | 0.998 | N | 0.664 | 0.36 | None | 1000 genomes | 4.59265E-03 | None | None | None | None | N | None | 0 | 0 | None | None | 2.28E-02 | 0 | None | None | None | 0 | None |
T/M | rs56372592 | -0.241 | 0.998 | N | 0.664 | 0.36 | None | gnomAD-4.0.0 | 5.79551E-04 | None | None | None | None | N | None | 5.06802E-04 | 3.16941E-04 | None | 0 | 1.28566E-02 | None | 0 | 0 | 8.47781E-05 | 2.85589E-04 | 2.81807E-03 |
T/R | None | None | 0.998 | N | 0.649 | 0.335 | 0.370789594751 | gnomAD-4.0.0 | 6.84389E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52232E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1103 | likely_benign | 0.1158 | benign | -1.184 | Destabilizing | 0.892 | D | 0.478 | neutral | N | 0.47448484 | None | None | N |
T/C | 0.3234 | likely_benign | 0.3526 | ambiguous | -0.72 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
T/D | 0.575 | likely_pathogenic | 0.6068 | pathogenic | -0.839 | Destabilizing | 0.996 | D | 0.646 | neutral | None | None | None | None | N |
T/E | 0.4218 | ambiguous | 0.4415 | ambiguous | -0.634 | Destabilizing | 0.996 | D | 0.637 | neutral | None | None | None | None | N |
T/F | 0.1906 | likely_benign | 0.2028 | benign | -0.916 | Destabilizing | 0.975 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/G | 0.3872 | ambiguous | 0.4083 | ambiguous | -1.602 | Destabilizing | 0.987 | D | 0.609 | neutral | None | None | None | None | N |
T/H | 0.2229 | likely_benign | 0.245 | benign | -1.643 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/I | 0.1012 | likely_benign | 0.0947 | benign | -0.084 | Destabilizing | 0.033 | N | 0.367 | neutral | None | None | None | None | N |
T/K | 0.3097 | likely_benign | 0.3283 | benign | -0.199 | Destabilizing | 0.993 | D | 0.644 | neutral | N | 0.493633499 | None | None | N |
T/L | 0.0836 | likely_benign | 0.0862 | benign | -0.084 | Destabilizing | 0.437 | N | 0.513 | neutral | None | None | None | None | N |
T/M | 0.0772 | likely_benign | 0.0785 | benign | -0.126 | Destabilizing | 0.998 | D | 0.664 | neutral | N | 0.458039653 | None | None | N |
T/N | 0.1354 | likely_benign | 0.1391 | benign | -0.842 | Destabilizing | 0.996 | D | 0.567 | neutral | None | None | None | None | N |
T/P | 0.6695 | likely_pathogenic | 0.6809 | pathogenic | -0.42 | Destabilizing | 0.994 | D | 0.642 | neutral | N | 0.490894028 | None | None | N |
T/Q | 0.2612 | likely_benign | 0.2748 | benign | -0.618 | Destabilizing | 0.996 | D | 0.662 | neutral | None | None | None | None | N |
T/R | 0.2408 | likely_benign | 0.2642 | benign | -0.48 | Destabilizing | 0.998 | D | 0.649 | neutral | N | 0.472103433 | None | None | N |
T/S | 0.116 | likely_benign | 0.1217 | benign | -1.193 | Destabilizing | 0.944 | D | 0.422 | neutral | N | 0.489073041 | None | None | N |
T/V | 0.0962 | likely_benign | 0.0947 | benign | -0.42 | Destabilizing | 0.437 | N | 0.473 | neutral | None | None | None | None | N |
T/W | 0.6353 | likely_pathogenic | 0.6729 | pathogenic | -0.961 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
T/Y | 0.2461 | likely_benign | 0.2693 | benign | -0.591 | Destabilizing | 0.987 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.