Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25602 | 77029;77030;77031 | chr2:178569328;178569327;178569326 | chr2:179434055;179434054;179434053 |
N2AB | 23961 | 72106;72107;72108 | chr2:178569328;178569327;178569326 | chr2:179434055;179434054;179434053 |
N2A | 23034 | 69325;69326;69327 | chr2:178569328;178569327;178569326 | chr2:179434055;179434054;179434053 |
N2B | 16537 | 49834;49835;49836 | chr2:178569328;178569327;178569326 | chr2:179434055;179434054;179434053 |
Novex-1 | 16662 | 50209;50210;50211 | chr2:178569328;178569327;178569326 | chr2:179434055;179434054;179434053 |
Novex-2 | 16729 | 50410;50411;50412 | chr2:178569328;178569327;178569326 | chr2:179434055;179434054;179434053 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1707254187 | None | 0.997 | D | 0.717 | 0.704 | 0.735842215327 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs1707254187 | None | 0.997 | D | 0.717 | 0.704 | 0.735842215327 | gnomAD-4.0.0 | 2.03009E-06 | None | None | None | None | N | None | 1.7477E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20498E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.888 | likely_pathogenic | 0.8909 | pathogenic | -1.609 | Destabilizing | 0.94 | D | 0.685 | prob.delet. | D | 0.654648479 | None | None | N |
P/C | 0.9945 | likely_pathogenic | 0.9948 | pathogenic | -2.114 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
P/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.256 | Highly Destabilizing | 0.977 | D | 0.793 | deleterious | None | None | None | None | N |
P/E | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -3.186 | Highly Destabilizing | 0.957 | D | 0.769 | deleterious | None | None | None | None | N |
P/F | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/G | 0.9963 | likely_pathogenic | 0.9965 | pathogenic | -1.928 | Destabilizing | 0.997 | D | 0.793 | deleterious | None | None | None | None | N |
P/H | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/I | 0.9947 | likely_pathogenic | 0.9954 | pathogenic | -0.786 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
P/K | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
P/L | 0.9792 | likely_pathogenic | 0.984 | pathogenic | -0.786 | Destabilizing | 0.856 | D | 0.677 | prob.neutral | D | 0.680590199 | None | None | N |
P/M | 0.9979 | likely_pathogenic | 0.9982 | pathogenic | -1.108 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
P/N | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.848 | Destabilizing | 0.996 | D | 0.824 | deleterious | None | None | None | None | N |
P/Q | 0.9985 | likely_pathogenic | 0.9987 | pathogenic | -2.009 | Highly Destabilizing | 0.998 | D | 0.806 | deleterious | D | 0.680792004 | None | None | N |
P/R | 0.9979 | likely_pathogenic | 0.9983 | pathogenic | -1.072 | Destabilizing | 0.998 | D | 0.825 | deleterious | D | 0.680590199 | None | None | N |
P/S | 0.9866 | likely_pathogenic | 0.9875 | pathogenic | -2.195 | Highly Destabilizing | 0.997 | D | 0.717 | prob.delet. | D | 0.664136869 | None | None | N |
P/T | 0.987 | likely_pathogenic | 0.988 | pathogenic | -2.023 | Highly Destabilizing | 0.988 | D | 0.747 | deleterious | D | 0.680590199 | None | None | N |
P/V | 0.9798 | likely_pathogenic | 0.9818 | pathogenic | -1.033 | Destabilizing | 0.997 | D | 0.801 | deleterious | None | None | None | None | N |
P/W | 0.9999 | likely_pathogenic | 1.0 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
P/Y | 0.9998 | likely_pathogenic | 0.9999 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.