Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25612 | 77059;77060;77061 | chr2:178569298;178569297;178569296 | chr2:179434025;179434024;179434023 |
N2AB | 23971 | 72136;72137;72138 | chr2:178569298;178569297;178569296 | chr2:179434025;179434024;179434023 |
N2A | 23044 | 69355;69356;69357 | chr2:178569298;178569297;178569296 | chr2:179434025;179434024;179434023 |
N2B | 16547 | 49864;49865;49866 | chr2:178569298;178569297;178569296 | chr2:179434025;179434024;179434023 |
Novex-1 | 16672 | 50239;50240;50241 | chr2:178569298;178569297;178569296 | chr2:179434025;179434024;179434023 |
Novex-2 | 16739 | 50440;50441;50442 | chr2:178569298;178569297;178569296 | chr2:179434025;179434024;179434023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1707240113 | None | None | N | 0.133 | 0.118 | 0.115124310173 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1273 | likely_benign | 0.1513 | benign | -0.677 | Destabilizing | 0.118 | N | 0.565 | neutral | N | 0.486688336 | None | None | N |
E/C | 0.7612 | likely_pathogenic | 0.8287 | pathogenic | -0.137 | Destabilizing | 0.936 | D | 0.674 | neutral | None | None | None | None | N |
E/D | 0.0756 | likely_benign | 0.0825 | benign | -0.548 | Destabilizing | None | N | 0.133 | neutral | N | 0.45387275 | None | None | N |
E/F | 0.7352 | likely_pathogenic | 0.8144 | pathogenic | -0.436 | Destabilizing | 0.964 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/G | 0.142 | likely_benign | 0.1631 | benign | -0.927 | Destabilizing | 0.309 | N | 0.567 | neutral | N | 0.485802963 | None | None | N |
E/H | 0.3581 | ambiguous | 0.4378 | ambiguous | -0.435 | Destabilizing | 0.863 | D | 0.609 | neutral | None | None | None | None | N |
E/I | 0.44 | ambiguous | 0.5331 | ambiguous | -0.032 | Destabilizing | 0.523 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/K | 0.1877 | likely_benign | 0.2188 | benign | 0.111 | Stabilizing | 0.199 | N | 0.491 | neutral | N | 0.485994001 | None | None | N |
E/L | 0.4432 | ambiguous | 0.5316 | ambiguous | -0.032 | Destabilizing | 0.523 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/M | 0.465 | ambiguous | 0.5427 | ambiguous | 0.255 | Stabilizing | 0.693 | D | 0.623 | neutral | None | None | None | None | N |
E/N | 0.1327 | likely_benign | 0.1621 | benign | -0.312 | Destabilizing | 0.112 | N | 0.601 | neutral | None | None | None | None | N |
E/P | 0.9248 | likely_pathogenic | 0.9394 | pathogenic | -0.227 | Destabilizing | 0.14 | N | 0.706 | prob.neutral | None | None | None | None | N |
E/Q | 0.138 | likely_benign | 0.1562 | benign | -0.255 | Destabilizing | 0.384 | N | 0.587 | neutral | N | 0.48319607 | None | None | N |
E/R | 0.3077 | likely_benign | 0.3674 | ambiguous | 0.287 | Stabilizing | 0.536 | D | 0.651 | neutral | None | None | None | None | N |
E/S | 0.1316 | likely_benign | 0.161 | benign | -0.496 | Destabilizing | 0.082 | N | 0.497 | neutral | None | None | None | None | N |
E/T | 0.1852 | likely_benign | 0.2269 | benign | -0.287 | Destabilizing | 0.463 | N | 0.633 | neutral | None | None | None | None | N |
E/V | 0.2811 | likely_benign | 0.3396 | benign | -0.227 | Destabilizing | 0.37 | N | 0.667 | neutral | N | 0.498996147 | None | None | N |
E/W | 0.8898 | likely_pathogenic | 0.9295 | pathogenic | -0.211 | Destabilizing | 0.986 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/Y | 0.5708 | likely_pathogenic | 0.678 | pathogenic | -0.178 | Destabilizing | 0.986 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.