Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25626 | 77101;77102;77103 | chr2:178569256;178569255;178569254 | chr2:179433983;179433982;179433981 |
N2AB | 23985 | 72178;72179;72180 | chr2:178569256;178569255;178569254 | chr2:179433983;179433982;179433981 |
N2A | 23058 | 69397;69398;69399 | chr2:178569256;178569255;178569254 | chr2:179433983;179433982;179433981 |
N2B | 16561 | 49906;49907;49908 | chr2:178569256;178569255;178569254 | chr2:179433983;179433982;179433981 |
Novex-1 | 16686 | 50281;50282;50283 | chr2:178569256;178569255;178569254 | chr2:179433983;179433982;179433981 |
Novex-2 | 16753 | 50482;50483;50484 | chr2:178569256;178569255;178569254 | chr2:179433983;179433982;179433981 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.757 | N | 0.331 | 0.185 | 0.246773566709 | gnomAD-4.0.0 | 6.88414E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03347E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1593 | likely_benign | 0.1776 | benign | -0.576 | Destabilizing | 0.002 | N | 0.162 | neutral | None | None | None | None | I |
L/C | 0.496 | ambiguous | 0.5513 | ambiguous | -0.673 | Destabilizing | 0.992 | D | 0.303 | neutral | None | None | None | None | I |
L/D | 0.5116 | ambiguous | 0.563 | ambiguous | -0.128 | Destabilizing | 0.836 | D | 0.344 | neutral | None | None | None | None | I |
L/E | 0.273 | likely_benign | 0.3037 | benign | -0.212 | Destabilizing | 0.35 | N | 0.367 | neutral | None | None | None | None | I |
L/F | 0.1338 | likely_benign | 0.1545 | benign | -0.55 | Destabilizing | 0.757 | D | 0.331 | neutral | N | 0.512906439 | None | None | I |
L/G | 0.4231 | ambiguous | 0.4789 | ambiguous | -0.738 | Destabilizing | 0.422 | N | 0.378 | neutral | None | None | None | None | I |
L/H | 0.2288 | likely_benign | 0.2531 | benign | 0.007 | Stabilizing | 0.004 | N | 0.363 | neutral | None | None | None | None | I |
L/I | 0.0728 | likely_benign | 0.077 | benign | -0.268 | Destabilizing | 0.041 | N | 0.359 | neutral | None | None | None | None | I |
L/K | 0.2843 | likely_benign | 0.3044 | benign | -0.347 | Destabilizing | None | N | 0.25 | neutral | None | None | None | None | I |
L/M | 0.1067 | likely_benign | 0.1129 | benign | -0.43 | Destabilizing | 0.74 | D | 0.345 | neutral | N | 0.491461276 | None | None | I |
L/N | 0.2736 | likely_benign | 0.2921 | benign | -0.186 | Destabilizing | 0.836 | D | 0.345 | neutral | None | None | None | None | I |
L/P | 0.259 | likely_benign | 0.3367 | benign | -0.338 | Destabilizing | 0.912 | D | 0.359 | neutral | None | None | None | None | I |
L/Q | 0.1406 | likely_benign | 0.1538 | benign | -0.383 | Destabilizing | 0.68 | D | 0.365 | neutral | None | None | None | None | I |
L/R | 0.2404 | likely_benign | 0.2768 | benign | 0.186 | Stabilizing | 0.225 | N | 0.358 | neutral | None | None | None | None | I |
L/S | 0.183 | likely_benign | 0.1948 | benign | -0.639 | Destabilizing | 0.355 | N | 0.339 | neutral | N | 0.486867816 | None | None | I |
L/T | 0.1667 | likely_benign | 0.1796 | benign | -0.612 | Destabilizing | 0.305 | N | 0.334 | neutral | None | None | None | None | I |
L/V | 0.0778 | likely_benign | 0.0853 | benign | -0.338 | Destabilizing | 0.009 | N | 0.339 | neutral | N | 0.469495563 | None | None | I |
L/W | 0.3307 | likely_benign | 0.3756 | ambiguous | -0.57 | Destabilizing | 0.993 | D | 0.395 | neutral | N | 0.503071071 | None | None | I |
L/Y | 0.3032 | likely_benign | 0.3401 | ambiguous | -0.327 | Destabilizing | 0.193 | N | 0.329 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.