Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2563 | 7912;7913;7914 | chr2:178773277;178773276;178773275 | chr2:179638004;179638003;179638002 |
N2AB | 2563 | 7912;7913;7914 | chr2:178773277;178773276;178773275 | chr2:179638004;179638003;179638002 |
N2A | 2563 | 7912;7913;7914 | chr2:178773277;178773276;178773275 | chr2:179638004;179638003;179638002 |
N2B | 2517 | 7774;7775;7776 | chr2:178773277;178773276;178773275 | chr2:179638004;179638003;179638002 |
Novex-1 | 2517 | 7774;7775;7776 | chr2:178773277;178773276;178773275 | chr2:179638004;179638003;179638002 |
Novex-2 | 2517 | 7774;7775;7776 | chr2:178773277;178773276;178773275 | chr2:179638004;179638003;179638002 |
Novex-3 | 2563 | 7912;7913;7914 | chr2:178773277;178773276;178773275 | chr2:179638004;179638003;179638002 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs775758080 | -2.187 | 0.959 | D | 0.766 | 0.908 | 0.879622353233 | gnomAD-2.1.1 | 7.98E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/D | rs775758080 | -2.187 | 0.959 | D | 0.766 | 0.908 | 0.879622353233 | gnomAD-4.0.0 | 3.18177E-06 | None | None | None | None | N | None | 0 | 4.5754E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2653 | likely_benign | 0.2469 | benign | -1.723 | Destabilizing | 0.061 | N | 0.328 | neutral | D | 0.540200853 | None | None | N |
V/C | 0.8023 | likely_pathogenic | 0.7965 | pathogenic | -1.179 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/D | 0.8908 | likely_pathogenic | 0.8712 | pathogenic | -2.018 | Highly Destabilizing | 0.959 | D | 0.766 | deleterious | D | 0.674978346 | None | None | N |
V/E | 0.8353 | likely_pathogenic | 0.81 | pathogenic | -1.825 | Destabilizing | 0.969 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/F | 0.5239 | ambiguous | 0.474 | ambiguous | -1.149 | Destabilizing | 0.996 | D | 0.707 | prob.neutral | D | 0.653163753 | None | None | N |
V/G | 0.4425 | ambiguous | 0.4157 | ambiguous | -2.151 | Highly Destabilizing | 0.852 | D | 0.718 | prob.delet. | D | 0.571438878 | None | None | N |
V/H | 0.9401 | likely_pathogenic | 0.929 | pathogenic | -1.568 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
V/I | 0.1141 | likely_benign | 0.1092 | benign | -0.541 | Destabilizing | 0.826 | D | 0.576 | neutral | D | 0.529367057 | None | None | N |
V/K | 0.8656 | likely_pathogenic | 0.8393 | pathogenic | -1.299 | Destabilizing | 0.939 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/L | 0.5727 | likely_pathogenic | 0.5365 | ambiguous | -0.541 | Destabilizing | 0.826 | D | 0.576 | neutral | D | 0.654153711 | None | None | N |
V/M | 0.4028 | ambiguous | 0.3686 | ambiguous | -0.63 | Destabilizing | 0.997 | D | 0.586 | neutral | None | None | None | None | N |
V/N | 0.7712 | likely_pathogenic | 0.7341 | pathogenic | -1.619 | Destabilizing | 0.991 | D | 0.778 | deleterious | None | None | None | None | N |
V/P | 0.6876 | likely_pathogenic | 0.6795 | pathogenic | -0.911 | Destabilizing | 0.02 | N | 0.481 | neutral | None | None | None | None | N |
V/Q | 0.8525 | likely_pathogenic | 0.8302 | pathogenic | -1.497 | Destabilizing | 0.997 | D | 0.789 | deleterious | None | None | None | None | N |
V/R | 0.833 | likely_pathogenic | 0.807 | pathogenic | -1.175 | Destabilizing | 0.991 | D | 0.792 | deleterious | None | None | None | None | N |
V/S | 0.5023 | ambiguous | 0.4635 | ambiguous | -2.167 | Highly Destabilizing | 0.884 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/T | 0.3652 | ambiguous | 0.3411 | ambiguous | -1.83 | Destabilizing | 0.17 | N | 0.351 | neutral | None | None | None | None | N |
V/W | 0.9797 | likely_pathogenic | 0.9755 | pathogenic | -1.437 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
V/Y | 0.893 | likely_pathogenic | 0.8701 | pathogenic | -1.066 | Destabilizing | 0.997 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.