Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25680 | 77263;77264;77265 | chr2:178569094;178569093;178569092 | chr2:179433821;179433820;179433819 |
N2AB | 24039 | 72340;72341;72342 | chr2:178569094;178569093;178569092 | chr2:179433821;179433820;179433819 |
N2A | 23112 | 69559;69560;69561 | chr2:178569094;178569093;178569092 | chr2:179433821;179433820;179433819 |
N2B | 16615 | 50068;50069;50070 | chr2:178569094;178569093;178569092 | chr2:179433821;179433820;179433819 |
Novex-1 | 16740 | 50443;50444;50445 | chr2:178569094;178569093;178569092 | chr2:179433821;179433820;179433819 |
Novex-2 | 16807 | 50644;50645;50646 | chr2:178569094;178569093;178569092 | chr2:179433821;179433820;179433819 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.941 | N | 0.375 | 0.22 | 0.336400405673 | gnomAD-4.0.0 | 6.84361E-07 | None | None | None | None | I | None | 2.99007E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1385780245 | 0.548 | 0.996 | N | 0.572 | 0.415 | 0.307966526162 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/K | rs1385780245 | 0.548 | 0.996 | N | 0.572 | 0.415 | 0.307966526162 | gnomAD-4.0.0 | 3.1841E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71961E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3375 | likely_benign | 0.3564 | ambiguous | -0.753 | Destabilizing | 0.992 | D | 0.59 | neutral | N | 0.514785136 | None | None | I |
E/C | 0.9565 | likely_pathogenic | 0.9551 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
E/D | 0.2126 | likely_benign | 0.2255 | benign | -0.497 | Destabilizing | 0.941 | D | 0.375 | neutral | N | 0.520057669 | None | None | I |
E/F | 0.9518 | likely_pathogenic | 0.9579 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
E/G | 0.5614 | ambiguous | 0.5845 | pathogenic | -0.974 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.476450304 | None | None | I |
E/H | 0.8467 | likely_pathogenic | 0.8593 | pathogenic | -0.073 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | I |
E/I | 0.5222 | ambiguous | 0.5396 | ambiguous | -0.185 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | I |
E/K | 0.4369 | ambiguous | 0.4639 | ambiguous | 0.134 | Stabilizing | 0.996 | D | 0.572 | neutral | N | 0.461972158 | None | None | I |
E/L | 0.7391 | likely_pathogenic | 0.7586 | pathogenic | -0.185 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | I |
E/M | 0.7266 | likely_pathogenic | 0.7452 | pathogenic | -0.026 | Destabilizing | 0.997 | D | 0.613 | neutral | None | None | None | None | I |
E/N | 0.5448 | ambiguous | 0.5746 | pathogenic | -0.411 | Destabilizing | 0.996 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/P | 0.8715 | likely_pathogenic | 0.8792 | pathogenic | -0.356 | Destabilizing | 0.987 | D | 0.615 | neutral | None | None | None | None | I |
E/Q | 0.3418 | ambiguous | 0.3648 | ambiguous | -0.347 | Destabilizing | 0.998 | D | 0.563 | neutral | N | 0.473988904 | None | None | I |
E/R | 0.6502 | likely_pathogenic | 0.6738 | pathogenic | 0.453 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
E/S | 0.4769 | ambiguous | 0.5108 | ambiguous | -0.554 | Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | I |
E/T | 0.459 | ambiguous | 0.483 | ambiguous | -0.357 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
E/V | 0.4074 | ambiguous | 0.4228 | ambiguous | -0.356 | Destabilizing | 0.996 | D | 0.624 | neutral | N | 0.47795215 | None | None | I |
E/W | 0.9899 | likely_pathogenic | 0.9912 | pathogenic | -0.102 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/Y | 0.9016 | likely_pathogenic | 0.9163 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.