Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25744 | 77455;77456;77457 | chr2:178568902;178568901;178568900 | chr2:179433629;179433628;179433627 |
N2AB | 24103 | 72532;72533;72534 | chr2:178568902;178568901;178568900 | chr2:179433629;179433628;179433627 |
N2A | 23176 | 69751;69752;69753 | chr2:178568902;178568901;178568900 | chr2:179433629;179433628;179433627 |
N2B | 16679 | 50260;50261;50262 | chr2:178568902;178568901;178568900 | chr2:179433629;179433628;179433627 |
Novex-1 | 16804 | 50635;50636;50637 | chr2:178568902;178568901;178568900 | chr2:179433629;179433628;179433627 |
Novex-2 | 16871 | 50836;50837;50838 | chr2:178568902;178568901;178568900 | chr2:179433629;179433628;179433627 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1482499927 | 0.367 | 0.325 | N | 0.218 | 0.098 | 0.0884992946249 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1482499927 | 0.367 | 0.325 | N | 0.218 | 0.098 | 0.0884992946249 | gnomAD-4.0.0 | 6.84423E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52067E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3016 | likely_benign | 0.3141 | benign | 0.055 | Stabilizing | 0.211 | N | 0.207 | neutral | None | None | None | None | N |
K/C | 0.6661 | likely_pathogenic | 0.6893 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.291 | neutral | None | None | None | None | N |
K/D | 0.4733 | ambiguous | 0.497 | ambiguous | -0.071 | Destabilizing | 0.96 | D | 0.276 | neutral | None | None | None | None | N |
K/E | 0.1875 | likely_benign | 0.2108 | benign | -0.076 | Destabilizing | 0.915 | D | 0.289 | neutral | N | 0.457179627 | None | None | N |
K/F | 0.7004 | likely_pathogenic | 0.717 | pathogenic | -0.24 | Destabilizing | 0.998 | D | 0.291 | neutral | None | None | None | None | N |
K/G | 0.4103 | ambiguous | 0.4337 | ambiguous | -0.098 | Destabilizing | 0.951 | D | 0.281 | neutral | None | None | None | None | N |
K/H | 0.2615 | likely_benign | 0.2717 | benign | -0.246 | Destabilizing | 0.993 | D | 0.266 | neutral | None | None | None | None | N |
K/I | 0.2565 | likely_benign | 0.2812 | benign | 0.375 | Stabilizing | 0.787 | D | 0.322 | neutral | N | 0.513363771 | None | None | N |
K/L | 0.3183 | likely_benign | 0.3429 | ambiguous | 0.375 | Stabilizing | 0.583 | D | 0.304 | neutral | None | None | None | None | N |
K/M | 0.1962 | likely_benign | 0.2111 | benign | 0.038 | Stabilizing | 0.992 | D | 0.269 | neutral | None | None | None | None | N |
K/N | 0.2794 | likely_benign | 0.2922 | benign | 0.211 | Stabilizing | 0.325 | N | 0.218 | neutral | N | 0.479192482 | None | None | N |
K/P | 0.792 | likely_pathogenic | 0.8013 | pathogenic | 0.294 | Stabilizing | 0.997 | D | 0.296 | neutral | None | None | None | None | N |
K/Q | 0.1209 | likely_benign | 0.1294 | benign | 0.067 | Stabilizing | 0.969 | D | 0.277 | neutral | N | 0.465647181 | None | None | N |
K/R | 0.0899 | likely_benign | 0.0912 | benign | 0.009 | Stabilizing | 0.931 | D | 0.265 | neutral | N | 0.453430033 | None | None | N |
K/S | 0.3412 | ambiguous | 0.3621 | ambiguous | -0.198 | Destabilizing | 0.908 | D | 0.311 | neutral | None | None | None | None | N |
K/T | 0.1285 | likely_benign | 0.1356 | benign | -0.073 | Destabilizing | 0.057 | N | 0.167 | neutral | N | 0.440674166 | None | None | N |
K/V | 0.244 | likely_benign | 0.268 | benign | 0.294 | Stabilizing | 0.648 | D | 0.327 | neutral | None | None | None | None | N |
K/W | 0.7724 | likely_pathogenic | 0.788 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.339 | neutral | None | None | None | None | N |
K/Y | 0.5487 | ambiguous | 0.5743 | pathogenic | 0.035 | Stabilizing | 0.98 | D | 0.281 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.