Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25767 | 77524;77525;77526 | chr2:178568833;178568832;178568831 | chr2:179433560;179433559;179433558 |
N2AB | 24126 | 72601;72602;72603 | chr2:178568833;178568832;178568831 | chr2:179433560;179433559;179433558 |
N2A | 23199 | 69820;69821;69822 | chr2:178568833;178568832;178568831 | chr2:179433560;179433559;179433558 |
N2B | 16702 | 50329;50330;50331 | chr2:178568833;178568832;178568831 | chr2:179433560;179433559;179433558 |
Novex-1 | 16827 | 50704;50705;50706 | chr2:178568833;178568832;178568831 | chr2:179433560;179433559;179433558 |
Novex-2 | 16894 | 50905;50906;50907 | chr2:178568833;178568832;178568831 | chr2:179433560;179433559;179433558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | rs1303024823 | None | 0.996 | D | 0.878 | 0.858 | 0.94193011176 | gnomAD-4.0.0 | 2.73781E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52334E-05 | None | 0 | 0 | 0 | 0 | 4.97117E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9912 | likely_pathogenic | 0.9904 | pathogenic | -3.102 | Highly Destabilizing | 0.979 | D | 0.85 | deleterious | None | None | None | None | N |
Y/C | 0.9229 | likely_pathogenic | 0.9024 | pathogenic | -1.918 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.649022935 | None | None | N |
Y/D | 0.9937 | likely_pathogenic | 0.9941 | pathogenic | -3.356 | Highly Destabilizing | 0.996 | D | 0.9 | deleterious | D | 0.681293822 | None | None | N |
Y/E | 0.9978 | likely_pathogenic | 0.9978 | pathogenic | -3.165 | Highly Destabilizing | 0.998 | D | 0.874 | deleterious | None | None | None | None | N |
Y/F | 0.2838 | likely_benign | 0.2242 | benign | -1.134 | Destabilizing | 0.981 | D | 0.734 | prob.delet. | D | 0.612381999 | None | None | N |
Y/G | 0.9791 | likely_pathogenic | 0.9802 | pathogenic | -3.515 | Highly Destabilizing | 0.226 | N | 0.69 | prob.neutral | None | None | None | None | N |
Y/H | 0.958 | likely_pathogenic | 0.9442 | pathogenic | -2.011 | Highly Destabilizing | 0.998 | D | 0.785 | deleterious | D | 0.665274461 | None | None | N |
Y/I | 0.9368 | likely_pathogenic | 0.9365 | pathogenic | -1.734 | Destabilizing | 0.987 | D | 0.826 | deleterious | None | None | None | None | N |
Y/K | 0.9956 | likely_pathogenic | 0.9955 | pathogenic | -2.3 | Highly Destabilizing | 0.975 | D | 0.873 | deleterious | None | None | None | None | N |
Y/L | 0.8938 | likely_pathogenic | 0.8976 | pathogenic | -1.734 | Destabilizing | 0.88 | D | 0.822 | deleterious | None | None | None | None | N |
Y/M | 0.9557 | likely_pathogenic | 0.9489 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Y/N | 0.942 | likely_pathogenic | 0.9382 | pathogenic | -3.052 | Highly Destabilizing | 0.996 | D | 0.878 | deleterious | D | 0.681092018 | None | None | N |
Y/P | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -2.204 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/Q | 0.9959 | likely_pathogenic | 0.9949 | pathogenic | -2.829 | Highly Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
Y/R | 0.9914 | likely_pathogenic | 0.9904 | pathogenic | -1.996 | Destabilizing | 0.996 | D | 0.878 | deleterious | None | None | None | None | N |
Y/S | 0.9805 | likely_pathogenic | 0.9791 | pathogenic | -3.427 | Highly Destabilizing | 0.996 | D | 0.85 | deleterious | D | 0.681293822 | None | None | N |
Y/T | 0.9902 | likely_pathogenic | 0.9896 | pathogenic | -3.119 | Highly Destabilizing | 0.998 | D | 0.874 | deleterious | None | None | None | None | N |
Y/V | 0.9007 | likely_pathogenic | 0.9013 | pathogenic | -2.204 | Highly Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
Y/W | 0.9014 | likely_pathogenic | 0.8805 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.