Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2576877527;77528;77529 chr2:178568830;178568829;178568828chr2:179433557;179433556;179433555
N2AB2412772604;72605;72606 chr2:178568830;178568829;178568828chr2:179433557;179433556;179433555
N2A2320069823;69824;69825 chr2:178568830;178568829;178568828chr2:179433557;179433556;179433555
N2B1670350332;50333;50334 chr2:178568830;178568829;178568828chr2:179433557;179433556;179433555
Novex-11682850707;50708;50709 chr2:178568830;178568829;178568828chr2:179433557;179433556;179433555
Novex-21689550908;50909;50910 chr2:178568830;178568829;178568828chr2:179433557;179433556;179433555
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-75
  • Domain position: 71
  • Structural Position: 105
  • Q(SASA): 0.2414
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I rs541266544 -0.658 0.134 N 0.505 0.123 0.438170831126 gnomAD-2.1.1 1.10953E-04 None None None None N None 0 0 None 0 5.15E-05 None 9.48394E-04 None 0 0 1.40805E-04
L/I rs541266544 -0.658 0.134 N 0.505 0.123 0.438170831126 gnomAD-3.1.2 5.26E-05 None None None None N None 0 0 0 0 0 None 0 0 0 1.657E-03 0
L/I rs541266544 -0.658 0.134 N 0.505 0.123 0.438170831126 1000 genomes 3.99361E-04 None None None None N None 0 0 None None 0 0 None None None 2E-03 None
L/I rs541266544 -0.658 0.134 N 0.505 0.123 0.438170831126 gnomAD-4.0.0 6.13697E-05 None None None None N None 0 0 None 0 0 None 0 0 0 1.03238E-03 8.00615E-05
L/P rs572569285 -1.497 0.996 N 0.623 0.338 0.785001498622 gnomAD-2.1.1 4.03E-06 None None None None N None 0 0 None 0 0 None 3.27E-05 None 0 0 0
L/P rs572569285 -1.497 0.996 N 0.623 0.338 0.785001498622 gnomAD-3.1.2 6.58E-06 None None None None N None 0 0 0 0 0 None 0 0 0 2.07297E-04 0
L/P rs572569285 -1.497 0.996 N 0.623 0.338 0.785001498622 1000 genomes 1.99681E-04 None None None None N None 0 0 None None 0 0 None None None 1E-03 None
L/P rs572569285 -1.497 0.996 N 0.623 0.338 0.785001498622 gnomAD-4.0.0 2.56364E-06 None None None None N None 0 0 None 0 0 None 0 0 0 2.68147E-05 0
L/V rs541266544 None 0.704 N 0.612 0.182 0.441844919209 gnomAD-4.0.0 2.73782E-06 None None None None N None 0 0 None 0 2.52309E-05 None 0 0 0 0 4.9715E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.155 likely_benign 0.1415 benign -2.268 Highly Destabilizing 0.863 D 0.56 neutral None None None None N
L/C 0.3453 ambiguous 0.3367 benign -1.215 Destabilizing 0.999 D 0.562 neutral None None None None N
L/D 0.5127 ambiguous 0.4994 ambiguous -2.757 Highly Destabilizing 0.982 D 0.61 neutral None None None None N
L/E 0.2713 likely_benign 0.2637 benign -2.488 Highly Destabilizing 0.884 D 0.57 neutral None None None None N
L/F 0.1074 likely_benign 0.1031 benign -1.29 Destabilizing 0.988 D 0.55 neutral N 0.410063257 None None N
L/G 0.408 ambiguous 0.3816 ambiguous -2.819 Highly Destabilizing 0.969 D 0.604 neutral None None None None N
L/H 0.1323 likely_benign 0.1337 benign -2.477 Highly Destabilizing 0.077 N 0.584 neutral N 0.453083316 None None N
L/I 0.0802 likely_benign 0.0782 benign -0.648 Destabilizing 0.134 N 0.505 neutral N 0.414565 None None N
L/K 0.2424 likely_benign 0.2381 benign -1.567 Destabilizing 0.884 D 0.545 neutral None None None None N
L/M 0.0866 likely_benign 0.0824 benign -0.608 Destabilizing 0.991 D 0.575 neutral None None None None N
L/N 0.2041 likely_benign 0.1958 benign -2.042 Highly Destabilizing 0.982 D 0.611 neutral None None None None N
L/P 0.9192 likely_pathogenic 0.9067 pathogenic -1.173 Destabilizing 0.996 D 0.623 neutral N 0.469634038 None None N
L/Q 0.0999 likely_benign 0.102 benign -1.808 Destabilizing 0.373 N 0.517 neutral None None None None N
L/R 0.1736 likely_benign 0.1752 benign -1.503 Destabilizing 0.976 D 0.589 neutral N 0.417469232 None None N
L/S 0.1284 likely_benign 0.1252 benign -2.631 Highly Destabilizing 0.939 D 0.545 neutral None None None None N
L/T 0.1156 likely_benign 0.1073 benign -2.223 Highly Destabilizing 0.969 D 0.509 neutral None None None None N
L/V 0.0773 likely_benign 0.074 benign -1.173 Destabilizing 0.704 D 0.612 neutral N 0.405982802 None None N
L/W 0.2158 likely_benign 0.2125 benign -1.774 Destabilizing 0.999 D 0.651 neutral None None None None N
L/Y 0.2271 likely_benign 0.2217 benign -1.434 Destabilizing 0.982 D 0.548 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.