Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25772 | 77539;77540;77541 | chr2:178568818;178568817;178568816 | chr2:179433545;179433544;179433543 |
N2AB | 24131 | 72616;72617;72618 | chr2:178568818;178568817;178568816 | chr2:179433545;179433544;179433543 |
N2A | 23204 | 69835;69836;69837 | chr2:178568818;178568817;178568816 | chr2:179433545;179433544;179433543 |
N2B | 16707 | 50344;50345;50346 | chr2:178568818;178568817;178568816 | chr2:179433545;179433544;179433543 |
Novex-1 | 16832 | 50719;50720;50721 | chr2:178568818;178568817;178568816 | chr2:179433545;179433544;179433543 |
Novex-2 | 16899 | 50920;50921;50922 | chr2:178568818;178568817;178568816 | chr2:179433545;179433544;179433543 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.181 | 0.045 | 0.240491677333 | gnomAD-4.0.0 | 6.84437E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99604E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1328 | likely_benign | 0.1287 | benign | -2.449 | Highly Destabilizing | None | N | 0.25 | neutral | N | 0.411100621 | None | None | N |
V/C | 0.561 | ambiguous | 0.5493 | ambiguous | -1.982 | Destabilizing | 0.628 | D | 0.666 | neutral | None | None | None | None | N |
V/D | 0.6437 | likely_pathogenic | 0.6102 | pathogenic | -3.267 | Highly Destabilizing | 0.171 | N | 0.691 | prob.neutral | N | 0.471622274 | None | None | N |
V/E | 0.4378 | ambiguous | 0.4177 | ambiguous | -3.079 | Highly Destabilizing | 0.072 | N | 0.657 | neutral | None | None | None | None | N |
V/F | 0.1436 | likely_benign | 0.1323 | benign | -1.386 | Destabilizing | None | N | 0.631 | neutral | N | 0.419914892 | None | None | N |
V/G | 0.3073 | likely_benign | 0.3047 | benign | -2.909 | Highly Destabilizing | 0.029 | N | 0.67 | neutral | N | 0.504936288 | None | None | N |
V/H | 0.5823 | likely_pathogenic | 0.5479 | ambiguous | -2.499 | Highly Destabilizing | 0.864 | D | 0.66 | neutral | None | None | None | None | N |
V/I | 0.0786 | likely_benign | 0.0714 | benign | -1.158 | Destabilizing | None | N | 0.181 | neutral | N | 0.380876501 | None | None | N |
V/K | 0.5232 | ambiguous | 0.5036 | ambiguous | -2.058 | Highly Destabilizing | 0.072 | N | 0.654 | neutral | None | None | None | None | N |
V/L | 0.1667 | likely_benign | 0.151 | benign | -1.158 | Destabilizing | 0.002 | N | 0.412 | neutral | N | 0.438615296 | None | None | N |
V/M | 0.0949 | likely_benign | 0.0895 | benign | -1.303 | Destabilizing | 0.003 | N | 0.41 | neutral | None | None | None | None | N |
V/N | 0.4187 | ambiguous | 0.374 | ambiguous | -2.342 | Highly Destabilizing | 0.214 | N | 0.689 | prob.neutral | None | None | None | None | N |
V/P | 0.9781 | likely_pathogenic | 0.9683 | pathogenic | -1.567 | Destabilizing | 0.356 | N | 0.679 | prob.neutral | None | None | None | None | N |
V/Q | 0.3737 | ambiguous | 0.3593 | ambiguous | -2.239 | Highly Destabilizing | 0.214 | N | 0.665 | neutral | None | None | None | None | N |
V/R | 0.43 | ambiguous | 0.4182 | ambiguous | -1.74 | Destabilizing | 0.214 | N | 0.691 | prob.neutral | None | None | None | None | N |
V/S | 0.1651 | likely_benign | 0.1601 | benign | -2.855 | Highly Destabilizing | None | N | 0.498 | neutral | None | None | None | None | N |
V/T | 0.1252 | likely_benign | 0.1254 | benign | -2.556 | Highly Destabilizing | 0.016 | N | 0.539 | neutral | None | None | None | None | N |
V/W | 0.7554 | likely_pathogenic | 0.753 | pathogenic | -1.871 | Destabilizing | 0.864 | D | 0.67 | neutral | None | None | None | None | N |
V/Y | 0.5174 | ambiguous | 0.4806 | ambiguous | -1.616 | Destabilizing | 0.12 | N | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.