Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25789 | 77590;77591;77592 | chr2:178568767;178568766;178568765 | chr2:179433494;179433493;179433492 |
N2AB | 24148 | 72667;72668;72669 | chr2:178568767;178568766;178568765 | chr2:179433494;179433493;179433492 |
N2A | 23221 | 69886;69887;69888 | chr2:178568767;178568766;178568765 | chr2:179433494;179433493;179433492 |
N2B | 16724 | 50395;50396;50397 | chr2:178568767;178568766;178568765 | chr2:179433494;179433493;179433492 |
Novex-1 | 16849 | 50770;50771;50772 | chr2:178568767;178568766;178568765 | chr2:179433494;179433493;179433492 |
Novex-2 | 16916 | 50971;50972;50973 | chr2:178568767;178568766;178568765 | chr2:179433494;179433493;179433492 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1253687329 | None | None | N | 0.219 | 0.052 | 0.315314060047 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | rs1253687329 | None | None | N | 0.155 | 0.05 | 0.314417295294 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5625 | ambiguous | 0.4603 | ambiguous | -2.278 | Highly Destabilizing | 0.016 | N | 0.569 | neutral | None | None | None | None | N |
I/C | 0.8853 | likely_pathogenic | 0.845 | pathogenic | -1.497 | Destabilizing | 0.366 | N | 0.608 | neutral | None | None | None | None | N |
I/D | 0.9896 | likely_pathogenic | 0.9848 | pathogenic | -2.869 | Highly Destabilizing | 0.366 | N | 0.681 | prob.neutral | None | None | None | None | N |
I/E | 0.9655 | likely_pathogenic | 0.9512 | pathogenic | -2.622 | Highly Destabilizing | 0.366 | N | 0.692 | prob.delet. | None | None | None | None | N |
I/F | 0.5252 | ambiguous | 0.4222 | ambiguous | -1.404 | Destabilizing | 0.075 | N | 0.635 | neutral | None | None | None | None | N |
I/G | 0.952 | likely_pathogenic | 0.927 | pathogenic | -2.792 | Highly Destabilizing | 0.141 | N | 0.691 | prob.delet. | None | None | None | None | N |
I/H | 0.9549 | likely_pathogenic | 0.9306 | pathogenic | -2.167 | Highly Destabilizing | 0.869 | D | 0.67 | prob.neutral | None | None | None | None | N |
I/K | 0.9333 | likely_pathogenic | 0.9001 | pathogenic | -1.918 | Destabilizing | 0.11 | N | 0.695 | prob.delet. | N | 0.473300433 | None | None | N |
I/L | 0.2297 | likely_benign | 0.1776 | benign | -0.781 | Destabilizing | None | N | 0.219 | neutral | N | 0.488750541 | None | None | N |
I/M | 0.2135 | likely_benign | 0.17 | benign | -0.676 | Destabilizing | 0.177 | N | 0.595 | neutral | N | 0.474060902 | None | None | N |
I/N | 0.915 | likely_pathogenic | 0.8811 | pathogenic | -2.427 | Highly Destabilizing | 0.637 | D | 0.659 | prob.neutral | None | None | None | None | N |
I/P | 0.9777 | likely_pathogenic | 0.9716 | pathogenic | -1.264 | Destabilizing | 0.366 | N | 0.675 | prob.neutral | None | None | None | None | N |
I/Q | 0.9388 | likely_pathogenic | 0.9093 | pathogenic | -2.253 | Highly Destabilizing | 0.637 | D | 0.647 | neutral | None | None | None | None | N |
I/R | 0.9017 | likely_pathogenic | 0.8563 | pathogenic | -1.699 | Destabilizing | 0.303 | N | 0.664 | prob.neutral | N | 0.471526007 | None | None | N |
I/S | 0.7908 | likely_pathogenic | 0.7183 | pathogenic | -3.012 | Highly Destabilizing | 0.075 | N | 0.621 | neutral | None | None | None | None | N |
I/T | 0.408 | ambiguous | 0.3152 | benign | -2.615 | Highly Destabilizing | 0.012 | N | 0.637 | neutral | N | 0.458141785 | None | None | N |
I/V | 0.057 | likely_benign | 0.0536 | benign | -1.264 | Destabilizing | None | N | 0.155 | neutral | N | 0.368635136 | None | None | N |
I/W | 0.9766 | likely_pathogenic | 0.9664 | pathogenic | -1.77 | Destabilizing | 0.869 | D | 0.689 | prob.delet. | None | None | None | None | N |
I/Y | 0.9139 | likely_pathogenic | 0.8783 | pathogenic | -1.436 | Destabilizing | 0.366 | N | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.