Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2579 | 7960;7961;7962 | chr2:178773229;178773228;178773227 | chr2:179637956;179637955;179637954 |
N2AB | 2579 | 7960;7961;7962 | chr2:178773229;178773228;178773227 | chr2:179637956;179637955;179637954 |
N2A | 2579 | 7960;7961;7962 | chr2:178773229;178773228;178773227 | chr2:179637956;179637955;179637954 |
N2B | 2533 | 7822;7823;7824 | chr2:178773229;178773228;178773227 | chr2:179637956;179637955;179637954 |
Novex-1 | 2533 | 7822;7823;7824 | chr2:178773229;178773228;178773227 | chr2:179637956;179637955;179637954 |
Novex-2 | 2533 | 7822;7823;7824 | chr2:178773229;178773228;178773227 | chr2:179637956;179637955;179637954 |
Novex-3 | 2579 | 7960;7961;7962 | chr2:178773229;178773228;178773227 | chr2:179637956;179637955;179637954 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.41 | N | 0.382 | 0.325 | 0.26547132957 | gnomAD-4.0.0 | 2.05255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7987E-06 | 1.15964E-05 | 0 |
K/R | rs1222416655 | -0.502 | 0.581 | N | 0.423 | 0.303 | 0.376745185316 | gnomAD-2.1.1 | 4E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/R | rs1222416655 | -0.502 | 0.581 | N | 0.423 | 0.303 | 0.376745185316 | gnomAD-4.0.0 | 1.36836E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15961E-05 | 1.65629E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5553 | ambiguous | 0.4905 | ambiguous | -0.356 | Destabilizing | 0.648 | D | 0.536 | neutral | None | None | None | None | N |
K/C | 0.7871 | likely_pathogenic | 0.7716 | pathogenic | -0.442 | Destabilizing | 0.993 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/D | 0.7669 | likely_pathogenic | 0.6793 | pathogenic | 0.295 | Stabilizing | 0.764 | D | 0.603 | neutral | None | None | None | None | N |
K/E | 0.2768 | likely_benign | 0.2198 | benign | 0.373 | Stabilizing | 0.41 | N | 0.382 | neutral | N | 0.499488609 | None | None | N |
K/F | 0.8664 | likely_pathogenic | 0.8381 | pathogenic | -0.209 | Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/G | 0.7566 | likely_pathogenic | 0.6916 | pathogenic | -0.671 | Destabilizing | 0.48 | N | 0.55 | neutral | None | None | None | None | N |
K/H | 0.3427 | ambiguous | 0.3238 | benign | -0.968 | Destabilizing | 0.961 | D | 0.674 | neutral | None | None | None | None | N |
K/I | 0.4124 | ambiguous | 0.3463 | ambiguous | 0.432 | Stabilizing | 0.908 | D | 0.749 | deleterious | N | 0.517292166 | None | None | N |
K/L | 0.4661 | ambiguous | 0.4134 | ambiguous | 0.432 | Stabilizing | 0.866 | D | 0.615 | neutral | None | None | None | None | N |
K/M | 0.3153 | likely_benign | 0.2704 | benign | 0.243 | Stabilizing | 0.993 | D | 0.667 | neutral | None | None | None | None | N |
K/N | 0.5407 | ambiguous | 0.4384 | ambiguous | -0.078 | Destabilizing | 0.01 | N | 0.261 | neutral | D | 0.535257814 | None | None | N |
K/P | 0.9809 | likely_pathogenic | 0.969 | pathogenic | 0.2 | Stabilizing | 0.929 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/Q | 0.1598 | likely_benign | 0.1466 | benign | -0.184 | Destabilizing | 0.83 | D | 0.565 | neutral | N | 0.509080442 | None | None | N |
K/R | 0.0929 | likely_benign | 0.0929 | benign | -0.314 | Destabilizing | 0.581 | D | 0.423 | neutral | N | 0.491361187 | None | None | N |
K/S | 0.5713 | likely_pathogenic | 0.4902 | ambiguous | -0.76 | Destabilizing | 0.48 | N | 0.417 | neutral | None | None | None | None | N |
K/T | 0.2305 | likely_benign | 0.1863 | benign | -0.485 | Destabilizing | 0.709 | D | 0.629 | neutral | N | 0.513138986 | None | None | N |
K/V | 0.4088 | ambiguous | 0.3524 | ambiguous | 0.2 | Stabilizing | 0.929 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/W | 0.872 | likely_pathogenic | 0.8592 | pathogenic | -0.091 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Y | 0.7616 | likely_pathogenic | 0.7232 | pathogenic | 0.216 | Stabilizing | 0.976 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.