Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25800 | 77623;77624;77625 | chr2:178568734;178568733;178568732 | chr2:179433461;179433460;179433459 |
N2AB | 24159 | 72700;72701;72702 | chr2:178568734;178568733;178568732 | chr2:179433461;179433460;179433459 |
N2A | 23232 | 69919;69920;69921 | chr2:178568734;178568733;178568732 | chr2:179433461;179433460;179433459 |
N2B | 16735 | 50428;50429;50430 | chr2:178568734;178568733;178568732 | chr2:179433461;179433460;179433459 |
Novex-1 | 16860 | 50803;50804;50805 | chr2:178568734;178568733;178568732 | chr2:179433461;179433460;179433459 |
Novex-2 | 16927 | 51004;51005;51006 | chr2:178568734;178568733;178568732 | chr2:179433461;179433460;179433459 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.994 | N | 0.54 | 0.408 | 0.55767489547 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3733 | ambiguous | 0.3891 | ambiguous | -2.062 | Highly Destabilizing | 0.994 | D | 0.54 | neutral | N | 0.508350314 | None | None | N |
V/C | 0.7654 | likely_pathogenic | 0.7714 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/D | 0.9786 | likely_pathogenic | 0.9809 | pathogenic | -2.795 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/E | 0.9542 | likely_pathogenic | 0.9579 | pathogenic | -2.64 | Highly Destabilizing | 0.999 | D | 0.803 | deleterious | N | 0.496922599 | None | None | N |
V/F | 0.4017 | ambiguous | 0.4145 | ambiguous | -1.231 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
V/G | 0.6413 | likely_pathogenic | 0.6504 | pathogenic | -2.531 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.507680924 | None | None | N |
V/H | 0.9765 | likely_pathogenic | 0.9799 | pathogenic | -2.254 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/I | 0.0822 | likely_benign | 0.08 | benign | -0.779 | Destabilizing | 0.543 | D | 0.333 | neutral | N | 0.466252975 | None | None | N |
V/K | 0.9683 | likely_pathogenic | 0.9735 | pathogenic | -1.798 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/L | 0.3015 | likely_benign | 0.2923 | benign | -0.779 | Destabilizing | 0.948 | D | 0.462 | neutral | N | 0.472216155 | None | None | N |
V/M | 0.2765 | likely_benign | 0.2731 | benign | -0.913 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
V/N | 0.9336 | likely_pathogenic | 0.9396 | pathogenic | -1.97 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/P | 0.9487 | likely_pathogenic | 0.9547 | pathogenic | -1.179 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/Q | 0.9464 | likely_pathogenic | 0.9538 | pathogenic | -1.921 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/R | 0.9481 | likely_pathogenic | 0.9564 | pathogenic | -1.509 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/S | 0.7139 | likely_pathogenic | 0.7233 | pathogenic | -2.51 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/T | 0.5059 | ambiguous | 0.5252 | ambiguous | -2.233 | Highly Destabilizing | 0.996 | D | 0.625 | neutral | None | None | None | None | N |
V/W | 0.9668 | likely_pathogenic | 0.9696 | pathogenic | -1.704 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/Y | 0.888 | likely_pathogenic | 0.8968 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.