Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25802 | 77629;77630;77631 | chr2:178568728;178568727;178568726 | chr2:179433455;179433454;179433453 |
N2AB | 24161 | 72706;72707;72708 | chr2:178568728;178568727;178568726 | chr2:179433455;179433454;179433453 |
N2A | 23234 | 69925;69926;69927 | chr2:178568728;178568727;178568726 | chr2:179433455;179433454;179433453 |
N2B | 16737 | 50434;50435;50436 | chr2:178568728;178568727;178568726 | chr2:179433455;179433454;179433453 |
Novex-1 | 16862 | 50809;50810;50811 | chr2:178568728;178568727;178568726 | chr2:179433455;179433454;179433453 |
Novex-2 | 16929 | 51010;51011;51012 | chr2:178568728;178568727;178568726 | chr2:179433455;179433454;179433453 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.014 | N | 0.456 | 0.217 | 0.321672782286 | gnomAD-4.0.0 | 2.05337E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69898E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1263 | likely_benign | 0.1276 | benign | -1.248 | Destabilizing | 0.058 | N | 0.359 | neutral | N | 0.506981224 | None | None | N |
P/C | 0.6518 | likely_pathogenic | 0.6704 | pathogenic | -0.866 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
P/D | 0.865 | likely_pathogenic | 0.8667 | pathogenic | -1.171 | Destabilizing | 0.978 | D | 0.55 | neutral | None | None | None | None | N |
P/E | 0.6742 | likely_pathogenic | 0.6706 | pathogenic | -1.108 | Destabilizing | 0.978 | D | 0.52 | neutral | None | None | None | None | N |
P/F | 0.7179 | likely_pathogenic | 0.7226 | pathogenic | -0.785 | Destabilizing | 0.956 | D | 0.668 | neutral | None | None | None | None | N |
P/G | 0.5761 | likely_pathogenic | 0.5939 | pathogenic | -1.61 | Destabilizing | 0.86 | D | 0.568 | neutral | None | None | None | None | N |
P/H | 0.5609 | ambiguous | 0.5707 | pathogenic | -1.177 | Destabilizing | 0.997 | D | 0.639 | neutral | N | 0.4726046 | None | None | N |
P/I | 0.322 | likely_benign | 0.3289 | benign | -0.336 | Destabilizing | 0.915 | D | 0.607 | neutral | None | None | None | None | N |
P/K | 0.699 | likely_pathogenic | 0.7051 | pathogenic | -1.134 | Destabilizing | 0.956 | D | 0.517 | neutral | None | None | None | None | N |
P/L | 0.123 | likely_benign | 0.1299 | benign | -0.336 | Destabilizing | 0.014 | N | 0.456 | neutral | N | 0.428557726 | None | None | N |
P/M | 0.3422 | ambiguous | 0.3436 | ambiguous | -0.383 | Destabilizing | 0.988 | D | 0.639 | neutral | None | None | None | None | N |
P/N | 0.7251 | likely_pathogenic | 0.7298 | pathogenic | -1.081 | Destabilizing | 0.978 | D | 0.631 | neutral | None | None | None | None | N |
P/Q | 0.4722 | ambiguous | 0.4709 | ambiguous | -1.125 | Destabilizing | 0.993 | D | 0.597 | neutral | None | None | None | None | N |
P/R | 0.5912 | likely_pathogenic | 0.6007 | pathogenic | -0.769 | Destabilizing | 0.97 | D | 0.628 | neutral | N | 0.463993319 | None | None | N |
P/S | 0.3668 | ambiguous | 0.374 | ambiguous | -1.589 | Destabilizing | 0.698 | D | 0.537 | neutral | N | 0.456106507 | None | None | N |
P/T | 0.1805 | likely_benign | 0.1778 | benign | -1.404 | Destabilizing | 0.058 | N | 0.354 | neutral | N | 0.490395618 | None | None | N |
P/V | 0.1941 | likely_benign | 0.2011 | benign | -0.605 | Destabilizing | 0.754 | D | 0.577 | neutral | None | None | None | None | N |
P/W | 0.8651 | likely_pathogenic | 0.8754 | pathogenic | -1.078 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
P/Y | 0.7029 | likely_pathogenic | 0.7174 | pathogenic | -0.717 | Destabilizing | 0.978 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.