Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25808 | 77647;77648;77649 | chr2:178568710;178568709;178568708 | chr2:179433437;179433436;179433435 |
N2AB | 24167 | 72724;72725;72726 | chr2:178568710;178568709;178568708 | chr2:179433437;179433436;179433435 |
N2A | 23240 | 69943;69944;69945 | chr2:178568710;178568709;178568708 | chr2:179433437;179433436;179433435 |
N2B | 16743 | 50452;50453;50454 | chr2:178568710;178568709;178568708 | chr2:179433437;179433436;179433435 |
Novex-1 | 16868 | 50827;50828;50829 | chr2:178568710;178568709;178568708 | chr2:179433437;179433436;179433435 |
Novex-2 | 16935 | 51028;51029;51030 | chr2:178568710;178568709;178568708 | chr2:179433437;179433436;179433435 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1415635107 | None | 0.056 | D | 0.291 | 0.328 | 0.295974979623 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/R | rs1415635107 | None | 0.056 | D | 0.291 | 0.328 | 0.295974979623 | gnomAD-4.0.0 | 6.57419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47042E-05 | 0 | 0 |
S/T | None | None | 0.892 | N | 0.389 | 0.273 | 0.282575091529 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.13 | likely_benign | 0.1028 | benign | -0.167 | Destabilizing | 0.818 | D | 0.394 | neutral | None | None | None | None | N |
S/C | 0.1592 | likely_benign | 0.1326 | benign | -0.368 | Destabilizing | 0.999 | D | 0.543 | neutral | N | 0.509040958 | None | None | N |
S/D | 0.8235 | likely_pathogenic | 0.845 | pathogenic | 0.503 | Stabilizing | 0.957 | D | 0.464 | neutral | None | None | None | None | N |
S/E | 0.8863 | likely_pathogenic | 0.8826 | pathogenic | 0.429 | Stabilizing | 0.916 | D | 0.415 | neutral | None | None | None | None | N |
S/F | 0.3987 | ambiguous | 0.3198 | benign | -0.806 | Destabilizing | 0.996 | D | 0.601 | neutral | None | None | None | None | N |
S/G | 0.1624 | likely_benign | 0.1658 | benign | -0.273 | Destabilizing | 0.892 | D | 0.367 | neutral | N | 0.508027 | None | None | N |
S/H | 0.4965 | ambiguous | 0.4896 | ambiguous | -0.654 | Destabilizing | 0.997 | D | 0.549 | neutral | None | None | None | None | N |
S/I | 0.2859 | likely_benign | 0.2738 | benign | -0.025 | Destabilizing | 0.983 | D | 0.607 | neutral | N | 0.507585096 | None | None | N |
S/K | 0.9282 | likely_pathogenic | 0.9245 | pathogenic | -0.222 | Destabilizing | 0.845 | D | 0.376 | neutral | None | None | None | None | N |
S/L | 0.1694 | likely_benign | 0.143 | benign | -0.025 | Destabilizing | 0.916 | D | 0.521 | neutral | None | None | None | None | N |
S/M | 0.2619 | likely_benign | 0.2357 | benign | -0.119 | Destabilizing | 0.999 | D | 0.538 | neutral | None | None | None | None | N |
S/N | 0.2037 | likely_benign | 0.237 | benign | -0.101 | Destabilizing | 0.892 | D | 0.467 | neutral | N | 0.515049787 | None | None | N |
S/P | 0.6461 | likely_pathogenic | 0.607 | pathogenic | -0.044 | Destabilizing | 0.996 | D | 0.571 | neutral | None | None | None | None | N |
S/Q | 0.7252 | likely_pathogenic | 0.7082 | pathogenic | -0.236 | Destabilizing | 0.975 | D | 0.523 | neutral | None | None | None | None | N |
S/R | 0.8802 | likely_pathogenic | 0.874 | pathogenic | -0.095 | Destabilizing | 0.056 | N | 0.291 | neutral | D | 0.527805653 | None | None | N |
S/T | 0.0973 | likely_benign | 0.0968 | benign | -0.18 | Destabilizing | 0.892 | D | 0.389 | neutral | N | 0.456020126 | None | None | N |
S/V | 0.2672 | likely_benign | 0.2366 | benign | -0.044 | Destabilizing | 0.987 | D | 0.574 | neutral | None | None | None | None | N |
S/W | 0.5768 | likely_pathogenic | 0.5174 | ambiguous | -0.882 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
S/Y | 0.3511 | ambiguous | 0.3065 | benign | -0.539 | Destabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.