Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25809 | 77650;77651;77652 | chr2:178568707;178568706;178568705 | chr2:179433434;179433433;179433432 |
N2AB | 24168 | 72727;72728;72729 | chr2:178568707;178568706;178568705 | chr2:179433434;179433433;179433432 |
N2A | 23241 | 69946;69947;69948 | chr2:178568707;178568706;178568705 | chr2:179433434;179433433;179433432 |
N2B | 16744 | 50455;50456;50457 | chr2:178568707;178568706;178568705 | chr2:179433434;179433433;179433432 |
Novex-1 | 16869 | 50830;50831;50832 | chr2:178568707;178568706;178568705 | chr2:179433434;179433433;179433432 |
Novex-2 | 16936 | 51031;51032;51033 | chr2:178568707;178568706;178568705 | chr2:179433434;179433433;179433432 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs367819941 | -1.555 | 0.645 | N | 0.428 | 0.405 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/A | rs367819941 | -1.555 | 0.645 | N | 0.428 | 0.405 | None | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3725 | ambiguous | 0.4104 | ambiguous | -1.19 | Destabilizing | 0.645 | D | 0.428 | neutral | N | 0.48772438 | None | None | N |
V/C | 0.7757 | likely_pathogenic | 0.7656 | pathogenic | -0.901 | Destabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | N |
V/D | 0.9396 | likely_pathogenic | 0.9522 | pathogenic | -0.759 | Destabilizing | 0.945 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/E | 0.8621 | likely_pathogenic | 0.8839 | pathogenic | -0.819 | Destabilizing | 0.928 | D | 0.643 | neutral | D | 0.53123118 | None | None | N |
V/F | 0.4791 | ambiguous | 0.4859 | ambiguous | -1.144 | Destabilizing | 0.894 | D | 0.654 | neutral | None | None | None | None | N |
V/G | 0.5953 | likely_pathogenic | 0.6656 | pathogenic | -1.433 | Destabilizing | 0.928 | D | 0.691 | prob.neutral | D | 0.527356839 | None | None | N |
V/H | 0.9283 | likely_pathogenic | 0.9394 | pathogenic | -0.985 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/I | 0.0859 | likely_benign | 0.0745 | benign | -0.656 | Destabilizing | 0.006 | N | 0.236 | neutral | N | 0.488484849 | None | None | N |
V/K | 0.8377 | likely_pathogenic | 0.8629 | pathogenic | -0.886 | Destabilizing | 0.945 | D | 0.643 | neutral | None | None | None | None | N |
V/L | 0.3433 | ambiguous | 0.3119 | benign | -0.656 | Destabilizing | 0.114 | N | 0.389 | neutral | N | 0.492968301 | None | None | N |
V/M | 0.2856 | likely_benign | 0.2747 | benign | -0.489 | Destabilizing | 0.894 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/N | 0.8131 | likely_pathogenic | 0.8337 | pathogenic | -0.589 | Destabilizing | 0.981 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/P | 0.9706 | likely_pathogenic | 0.973 | pathogenic | -0.799 | Destabilizing | 0.981 | D | 0.667 | neutral | None | None | None | None | N |
V/Q | 0.7787 | likely_pathogenic | 0.8153 | pathogenic | -0.833 | Destabilizing | 0.981 | D | 0.672 | neutral | None | None | None | None | N |
V/R | 0.7892 | likely_pathogenic | 0.8244 | pathogenic | -0.37 | Destabilizing | 0.945 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/S | 0.5805 | likely_pathogenic | 0.6294 | pathogenic | -1.102 | Destabilizing | 0.945 | D | 0.654 | neutral | None | None | None | None | N |
V/T | 0.3887 | ambiguous | 0.4514 | ambiguous | -1.055 | Destabilizing | 0.707 | D | 0.63 | neutral | None | None | None | None | N |
V/W | 0.9755 | likely_pathogenic | 0.9757 | pathogenic | -1.228 | Destabilizing | 0.995 | D | 0.669 | neutral | None | None | None | None | N |
V/Y | 0.892 | likely_pathogenic | 0.8965 | pathogenic | -0.939 | Destabilizing | 0.945 | D | 0.66 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.