Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25810 | 77653;77654;77655 | chr2:178568704;178568703;178568702 | chr2:179433431;179433430;179433429 |
N2AB | 24169 | 72730;72731;72732 | chr2:178568704;178568703;178568702 | chr2:179433431;179433430;179433429 |
N2A | 23242 | 69949;69950;69951 | chr2:178568704;178568703;178568702 | chr2:179433431;179433430;179433429 |
N2B | 16745 | 50458;50459;50460 | chr2:178568704;178568703;178568702 | chr2:179433431;179433430;179433429 |
Novex-1 | 16870 | 50833;50834;50835 | chr2:178568704;178568703;178568702 | chr2:179433431;179433430;179433429 |
Novex-2 | 16937 | 51034;51035;51036 | chr2:178568704;178568703;178568702 | chr2:179433431;179433430;179433429 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.939 | N | 0.372 | 0.358 | 0.352910780287 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Q/P | None | None | 0.979 | N | 0.425 | 0.481 | 0.397391247328 | gnomAD-4.0.0 | 1.59226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85971E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2041 | likely_benign | 0.1859 | benign | -0.098 | Destabilizing | 0.543 | D | 0.425 | neutral | None | None | None | None | N |
Q/C | 0.6904 | likely_pathogenic | 0.6511 | pathogenic | 0.006 | Stabilizing | 0.996 | D | 0.495 | neutral | None | None | None | None | N |
Q/D | 0.657 | likely_pathogenic | 0.6491 | pathogenic | 0.007 | Stabilizing | 0.854 | D | 0.399 | neutral | None | None | None | None | N |
Q/E | 0.1265 | likely_benign | 0.132 | benign | -0.04 | Destabilizing | 0.472 | N | 0.411 | neutral | N | 0.482918725 | None | None | N |
Q/F | 0.7304 | likely_pathogenic | 0.7058 | pathogenic | -0.436 | Destabilizing | 0.953 | D | 0.477 | neutral | None | None | None | None | N |
Q/G | 0.4194 | ambiguous | 0.403 | ambiguous | -0.229 | Destabilizing | 0.742 | D | 0.492 | neutral | None | None | None | None | N |
Q/H | 0.2901 | likely_benign | 0.2628 | benign | -0.069 | Destabilizing | 0.939 | D | 0.372 | neutral | N | 0.517071371 | None | None | N |
Q/I | 0.3538 | ambiguous | 0.3392 | benign | 0.149 | Stabilizing | 0.082 | N | 0.44 | neutral | None | None | None | None | N |
Q/K | 0.1099 | likely_benign | 0.106 | benign | 0.089 | Stabilizing | 0.309 | N | 0.423 | neutral | N | 0.406708813 | None | None | N |
Q/L | 0.1107 | likely_benign | 0.1033 | benign | 0.149 | Stabilizing | 0.309 | N | 0.47 | neutral | N | 0.444093765 | None | None | N |
Q/M | 0.2954 | likely_benign | 0.2868 | benign | 0.228 | Stabilizing | 0.953 | D | 0.374 | neutral | None | None | None | None | N |
Q/N | 0.41 | ambiguous | 0.3835 | ambiguous | -0.258 | Destabilizing | 0.742 | D | 0.375 | neutral | None | None | None | None | N |
Q/P | 0.1233 | likely_benign | 0.113 | benign | 0.093 | Stabilizing | 0.979 | D | 0.425 | neutral | N | 0.49390651 | None | None | N |
Q/R | 0.1289 | likely_benign | 0.1227 | benign | 0.253 | Stabilizing | 0.007 | N | 0.291 | neutral | N | 0.44645928 | None | None | N |
Q/S | 0.3196 | likely_benign | 0.3013 | benign | -0.225 | Destabilizing | 0.742 | D | 0.394 | neutral | None | None | None | None | N |
Q/T | 0.2395 | likely_benign | 0.2277 | benign | -0.135 | Destabilizing | 0.742 | D | 0.457 | neutral | None | None | None | None | N |
Q/V | 0.215 | likely_benign | 0.2079 | benign | 0.093 | Stabilizing | 0.59 | D | 0.471 | neutral | None | None | None | None | N |
Q/W | 0.6985 | likely_pathogenic | 0.6813 | pathogenic | -0.475 | Destabilizing | 0.996 | D | 0.542 | neutral | None | None | None | None | N |
Q/Y | 0.5583 | ambiguous | 0.5338 | ambiguous | -0.191 | Destabilizing | 0.984 | D | 0.41 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.