Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25828 | 77707;77708;77709 | chr2:178568650;178568649;178568648 | chr2:179433377;179433376;179433375 |
N2AB | 24187 | 72784;72785;72786 | chr2:178568650;178568649;178568648 | chr2:179433377;179433376;179433375 |
N2A | 23260 | 70003;70004;70005 | chr2:178568650;178568649;178568648 | chr2:179433377;179433376;179433375 |
N2B | 16763 | 50512;50513;50514 | chr2:178568650;178568649;178568648 | chr2:179433377;179433376;179433375 |
Novex-1 | 16888 | 50887;50888;50889 | chr2:178568650;178568649;178568648 | chr2:179433377;179433376;179433375 |
Novex-2 | 16955 | 51088;51089;51090 | chr2:178568650;178568649;178568648 | chr2:179433377;179433376;179433375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs763550644 | -0.467 | 0.331 | D | 0.48 | 0.197 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.67448E-04 | None | 0 | None | 0 | 0 | 0 |
T/N | rs763550644 | -0.467 | 0.331 | D | 0.48 | 0.197 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 3.87297E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs763550644 | -0.467 | 0.331 | D | 0.48 | 0.197 | None | gnomAD-4.0.0 | 4.15314E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.47256E-03 | None | 0 | 0 | 0 | 0 | 1.60159E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.059 | likely_benign | 0.0577 | benign | -0.541 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.510374686 | None | None | I |
T/C | 0.2897 | likely_benign | 0.2701 | benign | -0.345 | Destabilizing | 0.909 | D | 0.635 | neutral | None | None | None | None | I |
T/D | 0.2963 | likely_benign | 0.2676 | benign | -0.057 | Destabilizing | 0.157 | N | 0.571 | neutral | None | None | None | None | I |
T/E | 0.2216 | likely_benign | 0.2058 | benign | -0.088 | Destabilizing | 0.001 | N | 0.339 | neutral | None | None | None | None | I |
T/F | 0.1941 | likely_benign | 0.1737 | benign | -0.755 | Destabilizing | 0.726 | D | 0.724 | prob.delet. | None | None | None | None | I |
T/G | 0.1668 | likely_benign | 0.157 | benign | -0.759 | Destabilizing | 0.157 | N | 0.578 | neutral | None | None | None | None | I |
T/H | 0.1876 | likely_benign | 0.1758 | benign | -1.058 | Destabilizing | 0.909 | D | 0.714 | prob.delet. | None | None | None | None | I |
T/I | 0.1028 | likely_benign | 0.0912 | benign | -0.07 | Destabilizing | 0.497 | N | 0.617 | neutral | N | 0.49051863 | None | None | I |
T/K | 0.1411 | likely_benign | 0.1276 | benign | -0.661 | Destabilizing | 0.157 | N | 0.573 | neutral | None | None | None | None | I |
T/L | 0.0775 | likely_benign | 0.0725 | benign | -0.07 | Destabilizing | 0.157 | N | 0.515 | neutral | None | None | None | None | I |
T/M | 0.0849 | likely_benign | 0.0802 | benign | 0.102 | Stabilizing | 0.909 | D | 0.625 | neutral | None | None | None | None | I |
T/N | 0.0921 | likely_benign | 0.0832 | benign | -0.513 | Destabilizing | 0.331 | N | 0.48 | neutral | D | 0.536406494 | None | None | I |
T/P | 0.3464 | ambiguous | 0.3315 | benign | -0.195 | Destabilizing | 0.497 | N | 0.615 | neutral | N | 0.52130909 | None | None | I |
T/Q | 0.1545 | likely_benign | 0.1452 | benign | -0.671 | Destabilizing | 0.396 | N | 0.628 | neutral | None | None | None | None | I |
T/R | 0.1361 | likely_benign | 0.1246 | benign | -0.411 | Destabilizing | 0.567 | D | 0.617 | neutral | None | None | None | None | I |
T/S | 0.0824 | likely_benign | 0.0781 | benign | -0.729 | Destabilizing | 0.001 | N | 0.283 | neutral | N | 0.521954329 | None | None | I |
T/V | 0.0809 | likely_benign | 0.0766 | benign | -0.195 | Destabilizing | 0.157 | N | 0.407 | neutral | None | None | None | None | I |
T/W | 0.5944 | likely_pathogenic | 0.5521 | ambiguous | -0.749 | Destabilizing | 0.968 | D | 0.734 | prob.delet. | None | None | None | None | I |
T/Y | 0.2323 | likely_benign | 0.2173 | benign | -0.5 | Destabilizing | 0.726 | D | 0.725 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.