Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25835 | 77728;77729;77730 | chr2:178568629;178568628;178568627 | chr2:179433356;179433355;179433354 |
N2AB | 24194 | 72805;72806;72807 | chr2:178568629;178568628;178568627 | chr2:179433356;179433355;179433354 |
N2A | 23267 | 70024;70025;70026 | chr2:178568629;178568628;178568627 | chr2:179433356;179433355;179433354 |
N2B | 16770 | 50533;50534;50535 | chr2:178568629;178568628;178568627 | chr2:179433356;179433355;179433354 |
Novex-1 | 16895 | 50908;50909;50910 | chr2:178568629;178568628;178568627 | chr2:179433356;179433355;179433354 |
Novex-2 | 16962 | 51109;51110;51111 | chr2:178568629;178568628;178568627 | chr2:179433356;179433355;179433354 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.004 | N | 0.297 | 0.107 | 0.0884992946249 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85994E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1749 | likely_benign | 0.1835 | benign | -0.22 | Destabilizing | 0.007 | N | 0.313 | neutral | N | 0.505460473 | None | None | N |
G/C | 0.1963 | likely_benign | 0.2123 | benign | -0.91 | Destabilizing | 0.976 | D | 0.711 | prob.delet. | D | 0.544328782 | None | None | N |
G/D | 0.1291 | likely_benign | 0.1397 | benign | -0.537 | Destabilizing | 0.004 | N | 0.297 | neutral | N | 0.516667861 | None | None | N |
G/E | 0.1887 | likely_benign | 0.1918 | benign | -0.701 | Destabilizing | 0.539 | D | 0.571 | neutral | None | None | None | None | N |
G/F | 0.499 | ambiguous | 0.5303 | ambiguous | -0.974 | Destabilizing | 0.947 | D | 0.701 | prob.neutral | None | None | None | None | N |
G/H | 0.2507 | likely_benign | 0.2687 | benign | -0.385 | Destabilizing | 0.947 | D | 0.633 | neutral | None | None | None | None | N |
G/I | 0.3267 | likely_benign | 0.3626 | ambiguous | -0.424 | Destabilizing | 0.826 | D | 0.71 | prob.delet. | None | None | None | None | N |
G/K | 0.2963 | likely_benign | 0.2983 | benign | -0.719 | Destabilizing | 0.7 | D | 0.617 | neutral | None | None | None | None | N |
G/L | 0.4084 | ambiguous | 0.4218 | ambiguous | -0.424 | Destabilizing | 0.7 | D | 0.689 | prob.neutral | None | None | None | None | N |
G/M | 0.4163 | ambiguous | 0.4294 | ambiguous | -0.518 | Destabilizing | 0.982 | D | 0.701 | prob.neutral | None | None | None | None | N |
G/N | 0.1397 | likely_benign | 0.139 | benign | -0.41 | Destabilizing | 0.539 | D | 0.593 | neutral | None | None | None | None | N |
G/P | 0.9163 | likely_pathogenic | 0.9316 | pathogenic | -0.326 | Destabilizing | 0.826 | D | 0.617 | neutral | None | None | None | None | N |
G/Q | 0.2254 | likely_benign | 0.2286 | benign | -0.685 | Destabilizing | 0.7 | D | 0.637 | neutral | None | None | None | None | N |
G/R | 0.2306 | likely_benign | 0.2394 | benign | -0.277 | Destabilizing | 0.638 | D | 0.633 | neutral | N | 0.507017409 | None | None | N |
G/S | 0.0995 | likely_benign | 0.1031 | benign | -0.548 | Destabilizing | 0.015 | N | 0.297 | neutral | N | 0.499660348 | None | None | N |
G/T | 0.1968 | likely_benign | 0.2044 | benign | -0.642 | Destabilizing | 0.539 | D | 0.567 | neutral | None | None | None | None | N |
G/V | 0.2669 | likely_benign | 0.2992 | benign | -0.326 | Destabilizing | 0.638 | D | 0.691 | prob.neutral | D | 0.544328782 | None | None | N |
G/W | 0.435 | ambiguous | 0.4665 | ambiguous | -1.108 | Destabilizing | 0.982 | D | 0.653 | neutral | None | None | None | None | N |
G/Y | 0.341 | ambiguous | 0.3653 | ambiguous | -0.772 | Destabilizing | 0.982 | D | 0.71 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.