Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25841 | 77746;77747;77748 | chr2:178568611;178568610;178568609 | chr2:179433338;179433337;179433336 |
N2AB | 24200 | 72823;72824;72825 | chr2:178568611;178568610;178568609 | chr2:179433338;179433337;179433336 |
N2A | 23273 | 70042;70043;70044 | chr2:178568611;178568610;178568609 | chr2:179433338;179433337;179433336 |
N2B | 16776 | 50551;50552;50553 | chr2:178568611;178568610;178568609 | chr2:179433338;179433337;179433336 |
Novex-1 | 16901 | 50926;50927;50928 | chr2:178568611;178568610;178568609 | chr2:179433338;179433337;179433336 |
Novex-2 | 16968 | 51127;51128;51129 | chr2:178568611;178568610;178568609 | chr2:179433338;179433337;179433336 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.717 | 0.445 | 0.412328234245 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.6249 | likely_pathogenic | 0.5941 | pathogenic | -0.321 | Destabilizing | 0.999 | D | 0.516 | neutral | N | 0.461919858 | None | None | N |
T/C | 0.9489 | likely_pathogenic | 0.9484 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/D | 0.7691 | likely_pathogenic | 0.7574 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/E | 0.9077 | likely_pathogenic | 0.898 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
T/F | 0.9457 | likely_pathogenic | 0.9361 | pathogenic | -0.802 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/G | 0.6539 | likely_pathogenic | 0.6468 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/H | 0.8354 | likely_pathogenic | 0.8338 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/I | 0.9448 | likely_pathogenic | 0.933 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.484178396 | None | None | N |
T/K | 0.847 | likely_pathogenic | 0.843 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/L | 0.6947 | likely_pathogenic | 0.6533 | pathogenic | -0.091 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
T/M | 0.4461 | ambiguous | 0.4206 | ambiguous | 0.088 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/N | 0.3796 | ambiguous | 0.3795 | ambiguous | -0.129 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.498361741 | None | None | N |
T/P | 0.8637 | likely_pathogenic | 0.8441 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.462680327 | None | None | N |
T/Q | 0.8351 | likely_pathogenic | 0.8236 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
T/R | 0.8633 | likely_pathogenic | 0.8557 | pathogenic | -0.099 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
T/S | 0.3478 | ambiguous | 0.3396 | benign | -0.326 | Destabilizing | 0.999 | D | 0.518 | neutral | N | 0.469825558 | None | None | N |
T/V | 0.8603 | likely_pathogenic | 0.8338 | pathogenic | -0.139 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
T/W | 0.9828 | likely_pathogenic | 0.9806 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/Y | 0.922 | likely_pathogenic | 0.9165 | pathogenic | -0.537 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.