Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25852 | 77779;77780;77781 | chr2:178568578;178568577;178568576 | chr2:179433305;179433304;179433303 |
N2AB | 24211 | 72856;72857;72858 | chr2:178568578;178568577;178568576 | chr2:179433305;179433304;179433303 |
N2A | 23284 | 70075;70076;70077 | chr2:178568578;178568577;178568576 | chr2:179433305;179433304;179433303 |
N2B | 16787 | 50584;50585;50586 | chr2:178568578;178568577;178568576 | chr2:179433305;179433304;179433303 |
Novex-1 | 16912 | 50959;50960;50961 | chr2:178568578;178568577;178568576 | chr2:179433305;179433304;179433303 |
Novex-2 | 16979 | 51160;51161;51162 | chr2:178568578;178568577;178568576 | chr2:179433305;179433304;179433303 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.684 | N | 0.422 | 0.201 | 0.519514513453 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77408E-05 | None | 0 | 0 | 0 | 0 | 0 |
L/V | None | None | 0.684 | N | 0.417 | 0.252 | 0.542363599239 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85976E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1135 | likely_benign | 0.1109 | benign | -1.772 | Destabilizing | 0.543 | D | 0.469 | neutral | None | None | None | None | N |
L/C | 0.2008 | likely_benign | 0.1998 | benign | -1.331 | Destabilizing | 0.996 | D | 0.514 | neutral | None | None | None | None | N |
L/D | 0.4617 | ambiguous | 0.431 | ambiguous | -1.864 | Destabilizing | 0.742 | D | 0.624 | neutral | None | None | None | None | N |
L/E | 0.2268 | likely_benign | 0.2132 | benign | -1.873 | Destabilizing | 0.59 | D | 0.583 | neutral | None | None | None | None | N |
L/F | 0.0733 | likely_benign | 0.0682 | benign | -1.496 | Destabilizing | 0.007 | N | 0.255 | neutral | D | 0.524650705 | None | None | N |
L/G | 0.3031 | likely_benign | 0.2927 | benign | -2.069 | Highly Destabilizing | 0.742 | D | 0.604 | neutral | None | None | None | None | N |
L/H | 0.0847 | likely_benign | 0.0836 | benign | -1.321 | Destabilizing | 0.007 | N | 0.41 | neutral | N | 0.471971013 | None | None | N |
L/I | 0.0646 | likely_benign | 0.0611 | benign | -1.022 | Destabilizing | 0.684 | D | 0.422 | neutral | N | 0.489612624 | None | None | N |
L/K | 0.1271 | likely_benign | 0.1231 | benign | -1.17 | Destabilizing | 0.59 | D | 0.553 | neutral | None | None | None | None | N |
L/M | 0.0688 | likely_benign | 0.0676 | benign | -0.822 | Destabilizing | 0.953 | D | 0.499 | neutral | None | None | None | None | N |
L/N | 0.1772 | likely_benign | 0.1668 | benign | -1.084 | Destabilizing | 0.742 | D | 0.627 | neutral | None | None | None | None | N |
L/P | 0.895 | likely_pathogenic | 0.8933 | pathogenic | -1.243 | Destabilizing | 0.939 | D | 0.639 | neutral | D | 0.524477346 | None | None | N |
L/Q | 0.0775 | likely_benign | 0.077 | benign | -1.352 | Destabilizing | 0.037 | N | 0.339 | neutral | None | None | None | None | N |
L/R | 0.0913 | likely_benign | 0.0899 | benign | -0.547 | Destabilizing | 0.521 | D | 0.602 | neutral | N | 0.489612624 | None | None | N |
L/S | 0.1182 | likely_benign | 0.1096 | benign | -1.636 | Destabilizing | 0.742 | D | 0.558 | neutral | None | None | None | None | N |
L/T | 0.0832 | likely_benign | 0.0795 | benign | -1.537 | Destabilizing | 0.742 | D | 0.513 | neutral | None | None | None | None | N |
L/V | 0.0584 | likely_benign | 0.0568 | benign | -1.243 | Destabilizing | 0.684 | D | 0.417 | neutral | N | 0.457790994 | None | None | N |
L/W | 0.1578 | likely_benign | 0.1517 | benign | -1.57 | Destabilizing | 0.996 | D | 0.591 | neutral | None | None | None | None | N |
L/Y | 0.1604 | likely_benign | 0.1547 | benign | -1.305 | Destabilizing | 0.59 | D | 0.515 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.