Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25854 | 77785;77786;77787 | chr2:178568572;178568571;178568570 | chr2:179433299;179433298;179433297 |
N2AB | 24213 | 72862;72863;72864 | chr2:178568572;178568571;178568570 | chr2:179433299;179433298;179433297 |
N2A | 23286 | 70081;70082;70083 | chr2:178568572;178568571;178568570 | chr2:179433299;179433298;179433297 |
N2B | 16789 | 50590;50591;50592 | chr2:178568572;178568571;178568570 | chr2:179433299;179433298;179433297 |
Novex-1 | 16914 | 50965;50966;50967 | chr2:178568572;178568571;178568570 | chr2:179433299;179433298;179433297 |
Novex-2 | 16981 | 51166;51167;51168 | chr2:178568572;178568571;178568570 | chr2:179433299;179433298;179433297 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs886055245 | -0.126 | None | N | 0.342 | 0.17 | 0.277730125212 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/I | rs886055245 | -0.126 | None | N | 0.342 | 0.17 | 0.277730125212 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs886055245 | -0.126 | None | N | 0.342 | 0.17 | 0.277730125212 | gnomAD-4.0.0 | 2.56333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78822E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0841 | likely_benign | 0.0832 | benign | -1.12 | Destabilizing | 0.027 | N | 0.561 | neutral | N | 0.5169008 | None | None | N |
T/C | 0.2293 | likely_benign | 0.232 | benign | -1.148 | Destabilizing | 0.824 | D | 0.583 | neutral | None | None | None | None | N |
T/D | 0.4501 | ambiguous | 0.4178 | ambiguous | -1.972 | Destabilizing | 0.555 | D | 0.65 | neutral | None | None | None | None | N |
T/E | 0.277 | likely_benign | 0.2746 | benign | -1.809 | Destabilizing | 0.555 | D | 0.648 | neutral | None | None | None | None | N |
T/F | 0.1361 | likely_benign | 0.1323 | benign | -0.946 | Destabilizing | 0.38 | N | 0.627 | neutral | None | None | None | None | N |
T/G | 0.2357 | likely_benign | 0.2277 | benign | -1.492 | Destabilizing | 0.262 | N | 0.645 | neutral | None | None | None | None | N |
T/H | 0.1771 | likely_benign | 0.1711 | benign | -1.707 | Destabilizing | 0.935 | D | 0.587 | neutral | None | None | None | None | N |
T/I | 0.064 | likely_benign | 0.0682 | benign | -0.164 | Destabilizing | None | N | 0.342 | neutral | N | 0.498277754 | None | None | N |
T/K | 0.1785 | likely_benign | 0.1743 | benign | -0.831 | Destabilizing | 0.484 | N | 0.651 | neutral | N | 0.459911367 | None | None | N |
T/L | 0.0623 | likely_benign | 0.0635 | benign | -0.164 | Destabilizing | 0.005 | N | 0.533 | neutral | None | None | None | None | N |
T/M | 0.0703 | likely_benign | 0.0698 | benign | -0.113 | Destabilizing | 0.38 | N | 0.614 | neutral | None | None | None | None | N |
T/N | 0.1268 | likely_benign | 0.1187 | benign | -1.524 | Destabilizing | 0.791 | D | 0.645 | neutral | None | None | None | None | N |
T/P | 0.6905 | likely_pathogenic | 0.6782 | pathogenic | -0.451 | Destabilizing | 0.484 | N | 0.632 | neutral | N | 0.517237847 | None | None | N |
T/Q | 0.1816 | likely_benign | 0.1807 | benign | -1.419 | Destabilizing | 0.791 | D | 0.635 | neutral | None | None | None | None | N |
T/R | 0.145 | likely_benign | 0.1377 | benign | -0.883 | Destabilizing | 0.484 | N | 0.641 | neutral | N | 0.515476648 | None | None | N |
T/S | 0.0959 | likely_benign | 0.0913 | benign | -1.64 | Destabilizing | 0.117 | N | 0.582 | neutral | N | 0.464623753 | None | None | N |
T/V | 0.0582 | likely_benign | 0.0627 | benign | -0.451 | Destabilizing | None | N | 0.193 | neutral | None | None | None | None | N |
T/W | 0.4678 | ambiguous | 0.4235 | ambiguous | -1.11 | Destabilizing | 0.935 | D | 0.625 | neutral | None | None | None | None | N |
T/Y | 0.1817 | likely_benign | 0.1721 | benign | -0.721 | Destabilizing | 0.555 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.