Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25856 | 77791;77792;77793 | chr2:178568566;178568565;178568564 | chr2:179433293;179433292;179433291 |
N2AB | 24215 | 72868;72869;72870 | chr2:178568566;178568565;178568564 | chr2:179433293;179433292;179433291 |
N2A | 23288 | 70087;70088;70089 | chr2:178568566;178568565;178568564 | chr2:179433293;179433292;179433291 |
N2B | 16791 | 50596;50597;50598 | chr2:178568566;178568565;178568564 | chr2:179433293;179433292;179433291 |
Novex-1 | 16916 | 50971;50972;50973 | chr2:178568566;178568565;178568564 | chr2:179433293;179433292;179433291 |
Novex-2 | 16983 | 51172;51173;51174 | chr2:178568566;178568565;178568564 | chr2:179433293;179433292;179433291 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.09 | N | 0.545 | 0.147 | 0.252681307341 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
S/N | None | None | 0.001 | N | 0.252 | 0.091 | 0.139678290688 | gnomAD-4.0.0 | 3.18377E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76963E-05 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.089 | likely_benign | 0.0859 | benign | -0.683 | Destabilizing | 0.116 | N | 0.487 | neutral | None | None | None | None | N |
S/C | 0.067 | likely_benign | 0.072 | benign | -0.819 | Destabilizing | 0.928 | D | 0.558 | neutral | N | 0.51126012 | None | None | N |
S/D | 0.3477 | ambiguous | 0.341 | ambiguous | -1.43 | Destabilizing | 0.241 | N | 0.565 | neutral | None | None | None | None | N |
S/E | 0.465 | ambiguous | 0.4567 | ambiguous | -1.344 | Destabilizing | 0.388 | N | 0.559 | neutral | None | None | None | None | N |
S/F | 0.1203 | likely_benign | 0.1167 | benign | -0.72 | Destabilizing | 0.818 | D | 0.58 | neutral | None | None | None | None | N |
S/G | 0.1125 | likely_benign | 0.1209 | benign | -0.998 | Destabilizing | 0.09 | N | 0.545 | neutral | N | 0.48983384 | None | None | N |
S/H | 0.151 | likely_benign | 0.1619 | benign | -1.495 | Destabilizing | 0.69 | D | 0.567 | neutral | None | None | None | None | N |
S/I | 0.0845 | likely_benign | 0.0837 | benign | 0.066 | Stabilizing | 0.457 | N | 0.567 | neutral | N | 0.423331704 | None | None | N |
S/K | 0.5064 | ambiguous | 0.5154 | ambiguous | -0.791 | Destabilizing | 0.241 | N | 0.557 | neutral | None | None | None | None | N |
S/L | 0.0832 | likely_benign | 0.0804 | benign | 0.066 | Stabilizing | 0.241 | N | 0.562 | neutral | None | None | None | None | N |
S/M | 0.1214 | likely_benign | 0.1191 | benign | 0.193 | Stabilizing | 0.818 | D | 0.561 | neutral | None | None | None | None | N |
S/N | 0.074 | likely_benign | 0.0772 | benign | -1.197 | Destabilizing | 0.001 | N | 0.252 | neutral | N | 0.450673021 | None | None | N |
S/P | 0.9229 | likely_pathogenic | 0.9278 | pathogenic | -0.148 | Destabilizing | 0.818 | D | 0.571 | neutral | None | None | None | None | N |
S/Q | 0.3149 | likely_benign | 0.3296 | benign | -1.222 | Destabilizing | 0.69 | D | 0.579 | neutral | None | None | None | None | N |
S/R | 0.4145 | ambiguous | 0.423 | ambiguous | -0.823 | Destabilizing | 0.627 | D | 0.566 | neutral | N | 0.448515363 | None | None | N |
S/T | 0.0607 | likely_benign | 0.0596 | benign | -0.951 | Destabilizing | None | N | 0.256 | neutral | N | 0.395680956 | None | None | N |
S/V | 0.1068 | likely_benign | 0.104 | benign | -0.148 | Destabilizing | 0.241 | N | 0.545 | neutral | None | None | None | None | N |
S/W | 0.2322 | likely_benign | 0.2427 | benign | -0.862 | Destabilizing | 0.981 | D | 0.642 | neutral | None | None | None | None | N |
S/Y | 0.1154 | likely_benign | 0.1118 | benign | -0.492 | Destabilizing | 0.818 | D | 0.577 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.