Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25869 | 77830;77831;77832 | chr2:178568527;178568526;178568525 | chr2:179433254;179433253;179433252 |
N2AB | 24228 | 72907;72908;72909 | chr2:178568527;178568526;178568525 | chr2:179433254;179433253;179433252 |
N2A | 23301 | 70126;70127;70128 | chr2:178568527;178568526;178568525 | chr2:179433254;179433253;179433252 |
N2B | 16804 | 50635;50636;50637 | chr2:178568527;178568526;178568525 | chr2:179433254;179433253;179433252 |
Novex-1 | 16929 | 51010;51011;51012 | chr2:178568527;178568526;178568525 | chr2:179433254;179433253;179433252 |
Novex-2 | 16996 | 51211;51212;51213 | chr2:178568527;178568526;178568525 | chr2:179433254;179433253;179433252 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.491 | N | 0.687 | 0.128 | 0.401185642668 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0738 | likely_benign | 0.0691 | benign | -0.378 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.439198794 | None | None | N |
G/C | 0.1112 | likely_benign | 0.1103 | benign | -1.019 | Destabilizing | 0.991 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/D | 0.1672 | likely_benign | 0.159 | benign | -1.291 | Destabilizing | 0.209 | N | 0.615 | neutral | None | None | None | None | N |
G/E | 0.1284 | likely_benign | 0.1283 | benign | -1.16 | Destabilizing | 0.003 | N | 0.497 | neutral | N | 0.365490469 | None | None | N |
G/F | 0.2947 | likely_benign | 0.2693 | benign | -0.54 | Destabilizing | 0.901 | D | 0.687 | prob.neutral | None | None | None | None | N |
G/H | 0.189 | likely_benign | 0.1829 | benign | -1.571 | Destabilizing | 0.901 | D | 0.661 | neutral | None | None | None | None | N |
G/I | 0.1278 | likely_benign | 0.1162 | benign | 0.62 | Stabilizing | 0.818 | D | 0.71 | prob.delet. | None | None | None | None | N |
G/K | 0.2245 | likely_benign | 0.2103 | benign | -0.649 | Destabilizing | 0.39 | N | 0.641 | neutral | None | None | None | None | N |
G/L | 0.1794 | likely_benign | 0.1697 | benign | 0.62 | Stabilizing | 0.39 | N | 0.658 | neutral | None | None | None | None | N |
G/M | 0.2006 | likely_benign | 0.1844 | benign | 0.179 | Stabilizing | 0.965 | D | 0.68 | prob.neutral | None | None | None | None | N |
G/N | 0.1685 | likely_benign | 0.1558 | benign | -0.789 | Destabilizing | 0.007 | N | 0.223 | neutral | None | None | None | None | N |
G/P | 0.9562 | likely_pathogenic | 0.9518 | pathogenic | 0.334 | Stabilizing | 0.722 | D | 0.689 | prob.neutral | None | None | None | None | N |
G/Q | 0.1614 | likely_benign | 0.157 | benign | -0.641 | Destabilizing | 0.39 | N | 0.693 | prob.neutral | None | None | None | None | N |
G/R | 0.1732 | likely_benign | 0.1678 | benign | -0.913 | Destabilizing | 0.491 | N | 0.687 | prob.neutral | N | 0.424151984 | None | None | N |
G/S | 0.0739 | likely_benign | 0.0717 | benign | -1.192 | Destabilizing | 0.047 | N | 0.225 | neutral | None | None | None | None | N |
G/T | 0.0758 | likely_benign | 0.0721 | benign | -0.926 | Destabilizing | 0.002 | N | 0.471 | neutral | None | None | None | None | N |
G/V | 0.0982 | likely_benign | 0.0913 | benign | 0.334 | Stabilizing | 0.326 | N | 0.659 | neutral | N | 0.422074471 | None | None | N |
G/W | 0.295 | likely_benign | 0.2793 | benign | -1.252 | Destabilizing | 0.991 | D | 0.679 | prob.neutral | None | None | None | None | N |
G/Y | 0.246 | likely_benign | 0.2339 | benign | -0.604 | Destabilizing | 0.965 | D | 0.694 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.