Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2588 | 7987;7988;7989 | chr2:178773202;178773201;178773200 | chr2:179637929;179637928;179637927 |
N2AB | 2588 | 7987;7988;7989 | chr2:178773202;178773201;178773200 | chr2:179637929;179637928;179637927 |
N2A | 2588 | 7987;7988;7989 | chr2:178773202;178773201;178773200 | chr2:179637929;179637928;179637927 |
N2B | 2542 | 7849;7850;7851 | chr2:178773202;178773201;178773200 | chr2:179637929;179637928;179637927 |
Novex-1 | 2542 | 7849;7850;7851 | chr2:178773202;178773201;178773200 | chr2:179637929;179637928;179637927 |
Novex-2 | 2542 | 7849;7850;7851 | chr2:178773202;178773201;178773200 | chr2:179637929;179637928;179637927 |
Novex-3 | 2588 | 7987;7988;7989 | chr2:178773202;178773201;178773200 | chr2:179637929;179637928;179637927 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1361032185 | None | 0.801 | D | 0.505 | 0.189 | 0.210429274316 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
K/N | rs1361032185 | None | 0.801 | D | 0.505 | 0.189 | 0.210429274316 | gnomAD-4.0.0 | 6.57142E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6094 | likely_pathogenic | 0.5584 | ambiguous | -1.015 | Destabilizing | 0.525 | D | 0.47 | neutral | None | None | None | None | N |
K/C | 0.7451 | likely_pathogenic | 0.7246 | pathogenic | -1.201 | Destabilizing | 0.998 | D | 0.668 | neutral | None | None | None | None | N |
K/D | 0.9029 | likely_pathogenic | 0.8567 | pathogenic | -1.538 | Destabilizing | 0.842 | D | 0.517 | neutral | None | None | None | None | N |
K/E | 0.3656 | ambiguous | 0.3052 | benign | -1.306 | Destabilizing | 0.625 | D | 0.559 | neutral | N | 0.50892316 | None | None | N |
K/F | 0.8916 | likely_pathogenic | 0.8595 | pathogenic | -0.176 | Destabilizing | 0.974 | D | 0.654 | neutral | None | None | None | None | N |
K/G | 0.7787 | likely_pathogenic | 0.722 | pathogenic | -1.473 | Destabilizing | 0.842 | D | 0.591 | neutral | None | None | None | None | N |
K/H | 0.373 | ambiguous | 0.3526 | ambiguous | -1.778 | Destabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | N |
K/I | 0.52 | ambiguous | 0.4457 | ambiguous | 0.251 | Stabilizing | 0.934 | D | 0.645 | neutral | N | 0.513302393 | None | None | N |
K/L | 0.5576 | ambiguous | 0.5071 | ambiguous | 0.251 | Stabilizing | 0.728 | D | 0.573 | neutral | None | None | None | None | N |
K/M | 0.3767 | ambiguous | 0.3365 | benign | -0.062 | Destabilizing | 0.991 | D | 0.592 | neutral | None | None | None | None | N |
K/N | 0.674 | likely_pathogenic | 0.5942 | pathogenic | -1.652 | Destabilizing | 0.801 | D | 0.505 | neutral | D | 0.547251361 | None | None | N |
K/P | 0.9904 | likely_pathogenic | 0.9852 | pathogenic | -0.147 | Destabilizing | 0.974 | D | 0.575 | neutral | None | None | None | None | N |
K/Q | 0.1706 | likely_benign | 0.1617 | benign | -1.37 | Destabilizing | 0.801 | D | 0.551 | neutral | N | 0.512854558 | None | None | N |
K/R | 0.0912 | likely_benign | 0.0887 | benign | -1.415 | Destabilizing | 0.012 | N | 0.395 | neutral | N | 0.501550173 | None | None | N |
K/S | 0.5713 | likely_pathogenic | 0.514 | ambiguous | -2.084 | Highly Destabilizing | 0.08 | N | 0.291 | neutral | None | None | None | None | N |
K/T | 0.2228 | likely_benign | 0.1958 | benign | -1.626 | Destabilizing | 0.051 | N | 0.362 | neutral | N | 0.443957087 | None | None | N |
K/V | 0.5104 | ambiguous | 0.4478 | ambiguous | -0.147 | Destabilizing | 0.728 | D | 0.557 | neutral | None | None | None | None | N |
K/W | 0.8694 | likely_pathogenic | 0.8429 | pathogenic | -0.318 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Y | 0.7463 | likely_pathogenic | 0.6985 | pathogenic | 0.02 | Stabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.