Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25884 | 77875;77876;77877 | chr2:178568482;178568481;178568480 | chr2:179433209;179433208;179433207 |
N2AB | 24243 | 72952;72953;72954 | chr2:178568482;178568481;178568480 | chr2:179433209;179433208;179433207 |
N2A | 23316 | 70171;70172;70173 | chr2:178568482;178568481;178568480 | chr2:179433209;179433208;179433207 |
N2B | 16819 | 50680;50681;50682 | chr2:178568482;178568481;178568480 | chr2:179433209;179433208;179433207 |
Novex-1 | 16944 | 51055;51056;51057 | chr2:178568482;178568481;178568480 | chr2:179433209;179433208;179433207 |
Novex-2 | 17011 | 51256;51257;51258 | chr2:178568482;178568481;178568480 | chr2:179433209;179433208;179433207 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs748940985 | -0.879 | 0.014 | D | 0.301 | 0.133 | 0.327686398923 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 0 | 1.41603E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs748940985 | -0.879 | 0.014 | D | 0.301 | 0.133 | 0.327686398923 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs748940985 | -0.879 | 0.014 | D | 0.301 | 0.133 | 0.327686398923 | gnomAD-4.0.0 | 3.09925E-06 | None | None | None | None | N | None | 0 | 8.34084E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs747699837 | -0.029 | 0.963 | N | 0.578 | 0.303 | 0.328222422547 | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 0 | 2.83E-05 | None | 9.68E-05 | 0 | None | 3.27E-05 | None | 0 | 2.35E-05 | 0 |
E/K | rs747699837 | -0.029 | 0.963 | N | 0.578 | 0.303 | 0.328222422547 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 2.07125E-04 | 0 |
E/K | rs747699837 | -0.029 | 0.963 | N | 0.578 | 0.303 | 0.328222422547 | gnomAD-4.0.0 | 2.10757E-05 | None | None | None | None | N | None | 0 | 1.66828E-05 | None | 3.37952E-05 | 0 | None | 0 | 0 | 2.20418E-05 | 4.39203E-05 | 3.20359E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1397 | likely_benign | 0.1375 | benign | -1.096 | Destabilizing | 0.698 | D | 0.637 | neutral | D | 0.522613264 | None | None | N |
E/C | 0.6976 | likely_pathogenic | 0.6911 | pathogenic | -0.433 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/D | 0.0994 | likely_benign | 0.1076 | benign | -0.891 | Destabilizing | 0.014 | N | 0.301 | neutral | D | 0.523133339 | None | None | N |
E/F | 0.5979 | likely_pathogenic | 0.5915 | pathogenic | -0.621 | Destabilizing | 0.978 | D | 0.747 | deleterious | None | None | None | None | N |
E/G | 0.1756 | likely_benign | 0.1741 | benign | -1.422 | Destabilizing | 0.822 | D | 0.702 | prob.neutral | N | 0.515436967 | None | None | N |
E/H | 0.2867 | likely_benign | 0.2801 | benign | -0.777 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
E/I | 0.2561 | likely_benign | 0.2505 | benign | -0.208 | Destabilizing | 0.956 | D | 0.756 | deleterious | None | None | None | None | N |
E/K | 0.1418 | likely_benign | 0.1375 | benign | -0.281 | Destabilizing | 0.963 | D | 0.578 | neutral | N | 0.511876195 | None | None | N |
E/L | 0.3004 | likely_benign | 0.2884 | benign | -0.208 | Destabilizing | 0.915 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/M | 0.34 | ambiguous | 0.3259 | benign | 0.271 | Stabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/N | 0.152 | likely_benign | 0.1556 | benign | -0.806 | Destabilizing | 0.915 | D | 0.639 | neutral | None | None | None | None | N |
E/P | 0.7896 | likely_pathogenic | 0.8249 | pathogenic | -0.485 | Destabilizing | 0.978 | D | 0.746 | deleterious | None | None | None | None | N |
E/Q | 0.1087 | likely_benign | 0.1023 | benign | -0.721 | Destabilizing | 0.976 | D | 0.617 | neutral | D | 0.529539236 | None | None | N |
E/R | 0.2239 | likely_benign | 0.2162 | benign | -0.076 | Destabilizing | 0.956 | D | 0.655 | neutral | None | None | None | None | N |
E/S | 0.1355 | likely_benign | 0.1346 | benign | -1.107 | Destabilizing | 0.754 | D | 0.556 | neutral | None | None | None | None | N |
E/T | 0.1408 | likely_benign | 0.1324 | benign | -0.819 | Destabilizing | 0.043 | N | 0.41 | neutral | None | None | None | None | N |
E/V | 0.168 | likely_benign | 0.1663 | benign | -0.485 | Destabilizing | 0.89 | D | 0.709 | prob.delet. | N | 0.48729308 | None | None | N |
E/W | 0.823 | likely_pathogenic | 0.8116 | pathogenic | -0.284 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
E/Y | 0.4676 | ambiguous | 0.4649 | ambiguous | -0.321 | Destabilizing | 0.993 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.