Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2591 | 7996;7997;7998 | chr2:178773193;178773192;178773191 | chr2:179637920;179637919;179637918 |
N2AB | 2591 | 7996;7997;7998 | chr2:178773193;178773192;178773191 | chr2:179637920;179637919;179637918 |
N2A | 2591 | 7996;7997;7998 | chr2:178773193;178773192;178773191 | chr2:179637920;179637919;179637918 |
N2B | 2545 | 7858;7859;7860 | chr2:178773193;178773192;178773191 | chr2:179637920;179637919;179637918 |
Novex-1 | 2545 | 7858;7859;7860 | chr2:178773193;178773192;178773191 | chr2:179637920;179637919;179637918 |
Novex-2 | 2545 | 7858;7859;7860 | chr2:178773193;178773192;178773191 | chr2:179637920;179637919;179637918 |
Novex-3 | 2591 | 7996;7997;7998 | chr2:178773193;178773192;178773191 | chr2:179637920;179637919;179637918 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.003 | N | 0.235 | 0.073 | 0.229924730088 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6208 | likely_pathogenic | 0.6545 | pathogenic | -2.254 | Highly Destabilizing | 0.517 | D | 0.619 | neutral | D | 0.587007148 | None | None | N |
V/C | 0.9106 | likely_pathogenic | 0.9152 | pathogenic | -1.708 | Destabilizing | 0.996 | D | 0.781 | deleterious | None | None | None | None | N |
V/D | 0.976 | likely_pathogenic | 0.9749 | pathogenic | -3.288 | Highly Destabilizing | 0.983 | D | 0.884 | deleterious | D | 0.588397624 | None | None | N |
V/E | 0.9412 | likely_pathogenic | 0.9414 | pathogenic | -2.969 | Highly Destabilizing | 0.987 | D | 0.865 | deleterious | None | None | None | None | N |
V/F | 0.5422 | ambiguous | 0.5472 | ambiguous | -1.224 | Destabilizing | 0.901 | D | 0.783 | deleterious | N | 0.514037374 | None | None | N |
V/G | 0.8022 | likely_pathogenic | 0.8106 | pathogenic | -2.849 | Highly Destabilizing | 0.949 | D | 0.875 | deleterious | D | 0.588397624 | None | None | N |
V/H | 0.9707 | likely_pathogenic | 0.9709 | pathogenic | -2.862 | Highly Destabilizing | 0.996 | D | 0.88 | deleterious | None | None | None | None | N |
V/I | 0.0881 | likely_benign | 0.0947 | benign | -0.513 | Destabilizing | 0.003 | N | 0.235 | neutral | N | 0.370014603 | None | None | N |
V/K | 0.9474 | likely_pathogenic | 0.9439 | pathogenic | -1.799 | Destabilizing | 0.961 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.3603 | ambiguous | 0.3949 | ambiguous | -0.513 | Destabilizing | 0.075 | N | 0.372 | neutral | N | 0.477434028 | None | None | N |
V/M | 0.3691 | ambiguous | 0.4002 | ambiguous | -0.85 | Destabilizing | 0.923 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/N | 0.9313 | likely_pathogenic | 0.9323 | pathogenic | -2.497 | Highly Destabilizing | 0.987 | D | 0.889 | deleterious | None | None | None | None | N |
V/P | 0.9752 | likely_pathogenic | 0.9749 | pathogenic | -1.076 | Destabilizing | 0.987 | D | 0.868 | deleterious | None | None | None | None | N |
V/Q | 0.9365 | likely_pathogenic | 0.937 | pathogenic | -2.111 | Highly Destabilizing | 0.987 | D | 0.895 | deleterious | None | None | None | None | N |
V/R | 0.9259 | likely_pathogenic | 0.9223 | pathogenic | -1.966 | Destabilizing | 0.987 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.8498 | likely_pathogenic | 0.8571 | pathogenic | -2.953 | Highly Destabilizing | 0.961 | D | 0.841 | deleterious | None | None | None | None | N |
V/T | 0.7747 | likely_pathogenic | 0.7884 | pathogenic | -2.48 | Highly Destabilizing | 0.775 | D | 0.661 | neutral | None | None | None | None | N |
V/W | 0.9857 | likely_pathogenic | 0.9864 | pathogenic | -1.846 | Destabilizing | 0.996 | D | 0.873 | deleterious | None | None | None | None | N |
V/Y | 0.9241 | likely_pathogenic | 0.9226 | pathogenic | -1.532 | Destabilizing | 0.961 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.