Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25917 | 77974;77975;77976 | chr2:178568383;178568382;178568381 | chr2:179433110;179433109;179433108 |
N2AB | 24276 | 73051;73052;73053 | chr2:178568383;178568382;178568381 | chr2:179433110;179433109;179433108 |
N2A | 23349 | 70270;70271;70272 | chr2:178568383;178568382;178568381 | chr2:179433110;179433109;179433108 |
N2B | 16852 | 50779;50780;50781 | chr2:178568383;178568382;178568381 | chr2:179433110;179433109;179433108 |
Novex-1 | 16977 | 51154;51155;51156 | chr2:178568383;178568382;178568381 | chr2:179433110;179433109;179433108 |
Novex-2 | 17044 | 51355;51356;51357 | chr2:178568383;178568382;178568381 | chr2:179433110;179433109;179433108 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs370137092 | 0.57 | 0.994 | N | 0.577 | 0.317 | None | gnomAD-2.1.1 | 3.63E-05 | None | None | None | None | I | None | 0 | 5.82E-05 | None | 0 | 0 | None | 0 | None | 0 | 6.23E-05 | 0 |
Y/H | rs370137092 | 0.57 | 0.994 | N | 0.577 | 0.317 | None | gnomAD-3.1.2 | 6.57E-05 | None | None | None | None | I | None | 0 | 1.9667E-04 | 0 | 0 | 0 | None | 0 | 0 | 1.02941E-04 | 0 | 0 |
Y/H | rs370137092 | 0.57 | 0.994 | N | 0.577 | 0.317 | None | gnomAD-4.0.0 | 5.14524E-05 | None | None | None | None | I | None | 0 | 8.34585E-05 | None | 0 | 0 | None | 0 | 0 | 6.27354E-05 | 2.19602E-05 | 3.20431E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7115 | likely_pathogenic | 0.7096 | pathogenic | -0.906 | Destabilizing | 0.916 | D | 0.489 | neutral | None | None | None | None | I |
Y/C | 0.2817 | likely_benign | 0.2678 | benign | 0.076 | Stabilizing | 0.999 | D | 0.655 | neutral | N | 0.507863102 | None | None | I |
Y/D | 0.3684 | ambiguous | 0.4066 | ambiguous | 0.834 | Stabilizing | 0.025 | N | 0.489 | neutral | N | 0.418559737 | None | None | I |
Y/E | 0.7293 | likely_pathogenic | 0.753 | pathogenic | 0.816 | Stabilizing | 0.845 | D | 0.487 | neutral | None | None | None | None | I |
Y/F | 0.1071 | likely_benign | 0.1095 | benign | -0.495 | Destabilizing | 0.981 | D | 0.535 | neutral | N | 0.509856532 | None | None | I |
Y/G | 0.622 | likely_pathogenic | 0.6403 | pathogenic | -1.106 | Destabilizing | 0.975 | D | 0.517 | neutral | None | None | None | None | I |
Y/H | 0.2257 | likely_benign | 0.2354 | benign | 0.074 | Stabilizing | 0.994 | D | 0.577 | neutral | N | 0.515686426 | None | None | I |
Y/I | 0.7104 | likely_pathogenic | 0.7103 | pathogenic | -0.398 | Destabilizing | 0.987 | D | 0.579 | neutral | None | None | None | None | I |
Y/K | 0.7603 | likely_pathogenic | 0.7624 | pathogenic | 0.125 | Stabilizing | 0.975 | D | 0.605 | neutral | None | None | None | None | I |
Y/L | 0.6078 | likely_pathogenic | 0.6002 | pathogenic | -0.398 | Destabilizing | 0.957 | D | 0.557 | neutral | None | None | None | None | I |
Y/M | 0.7703 | likely_pathogenic | 0.76 | pathogenic | -0.119 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | I |
Y/N | 0.1974 | likely_benign | 0.2171 | benign | -0.014 | Destabilizing | 0.935 | D | 0.608 | neutral | N | 0.504141281 | None | None | I |
Y/P | 0.9606 | likely_pathogenic | 0.9677 | pathogenic | -0.548 | Destabilizing | 0.987 | D | 0.659 | neutral | None | None | None | None | I |
Y/Q | 0.6144 | likely_pathogenic | 0.6245 | pathogenic | -0.019 | Destabilizing | 0.987 | D | 0.571 | neutral | None | None | None | None | I |
Y/R | 0.613 | likely_pathogenic | 0.6159 | pathogenic | 0.473 | Stabilizing | 0.987 | D | 0.614 | neutral | None | None | None | None | I |
Y/S | 0.3167 | likely_benign | 0.3339 | benign | -0.498 | Destabilizing | 0.967 | D | 0.462 | neutral | N | 0.496060515 | None | None | I |
Y/T | 0.6475 | likely_pathogenic | 0.6499 | pathogenic | -0.427 | Destabilizing | 0.975 | D | 0.563 | neutral | None | None | None | None | I |
Y/V | 0.6062 | likely_pathogenic | 0.59 | pathogenic | -0.548 | Destabilizing | 0.987 | D | 0.513 | neutral | None | None | None | None | I |
Y/W | 0.6045 | likely_pathogenic | 0.6011 | pathogenic | -0.54 | Destabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.