Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2592 | 7999;8000;8001 | chr2:178773190;178773189;178773188 | chr2:179637917;179637916;179637915 |
N2AB | 2592 | 7999;8000;8001 | chr2:178773190;178773189;178773188 | chr2:179637917;179637916;179637915 |
N2A | 2592 | 7999;8000;8001 | chr2:178773190;178773189;178773188 | chr2:179637917;179637916;179637915 |
N2B | 2546 | 7861;7862;7863 | chr2:178773190;178773189;178773188 | chr2:179637917;179637916;179637915 |
Novex-1 | 2546 | 7861;7862;7863 | chr2:178773190;178773189;178773188 | chr2:179637917;179637916;179637915 |
Novex-2 | 2546 | 7861;7862;7863 | chr2:178773190;178773189;178773188 | chr2:179637917;179637916;179637915 |
Novex-3 | 2592 | 7999;8000;8001 | chr2:178773190;178773189;178773188 | chr2:179637917;179637916;179637915 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.005 | N | 0.093 | 0.091 | 0.350746614512 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85724E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1917 | likely_benign | 0.1991 | benign | -1.658 | Destabilizing | 0.525 | D | 0.371 | neutral | None | None | None | None | N |
L/C | 0.428 | ambiguous | 0.3978 | ambiguous | -0.863 | Destabilizing | 0.998 | D | 0.41 | neutral | None | None | None | None | N |
L/D | 0.5467 | ambiguous | 0.531 | ambiguous | -1.317 | Destabilizing | 0.949 | D | 0.517 | neutral | None | None | None | None | N |
L/E | 0.2304 | likely_benign | 0.217 | benign | -1.353 | Destabilizing | 0.728 | D | 0.487 | neutral | None | None | None | None | N |
L/F | 0.1299 | likely_benign | 0.1316 | benign | -1.366 | Destabilizing | 0.949 | D | 0.405 | neutral | None | None | None | None | N |
L/G | 0.4203 | ambiguous | 0.4509 | ambiguous | -1.951 | Destabilizing | 0.842 | D | 0.481 | neutral | None | None | None | None | N |
L/H | 0.1871 | likely_benign | 0.173 | benign | -1.185 | Destabilizing | 0.993 | D | 0.529 | neutral | None | None | None | None | N |
L/I | 0.0712 | likely_benign | 0.0711 | benign | -0.938 | Destabilizing | 0.005 | N | 0.093 | neutral | N | 0.461235397 | None | None | N |
L/K | 0.1783 | likely_benign | 0.1653 | benign | -1.055 | Destabilizing | 0.728 | D | 0.445 | neutral | None | None | None | None | N |
L/M | 0.0948 | likely_benign | 0.1 | benign | -0.553 | Destabilizing | 0.949 | D | 0.451 | neutral | None | None | None | None | N |
L/N | 0.2349 | likely_benign | 0.233 | benign | -0.795 | Destabilizing | 0.949 | D | 0.539 | neutral | None | None | None | None | N |
L/P | 0.4989 | ambiguous | 0.5227 | ambiguous | -1.147 | Destabilizing | 0.966 | D | 0.551 | neutral | N | 0.509489816 | None | None | N |
L/Q | 0.0945 | likely_benign | 0.096 | benign | -1.058 | Destabilizing | 0.111 | N | 0.391 | neutral | N | 0.467777208 | None | None | N |
L/R | 0.1543 | likely_benign | 0.1438 | benign | -0.376 | Destabilizing | 0.876 | D | 0.495 | neutral | N | 0.476116409 | None | None | N |
L/S | 0.1867 | likely_benign | 0.184 | benign | -1.353 | Destabilizing | 0.172 | N | 0.339 | neutral | None | None | None | None | N |
L/T | 0.1457 | likely_benign | 0.1484 | benign | -1.28 | Destabilizing | 0.728 | D | 0.379 | neutral | None | None | None | None | N |
L/V | 0.0808 | likely_benign | 0.0822 | benign | -1.147 | Destabilizing | 0.005 | N | 0.082 | neutral | N | 0.482147438 | None | None | N |
L/W | 0.2301 | likely_benign | 0.2201 | benign | -1.418 | Destabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
L/Y | 0.3042 | likely_benign | 0.2938 | benign | -1.2 | Destabilizing | 0.974 | D | 0.442 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.