Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25928 | 78007;78008;78009 | chr2:178568350;178568349;178568348 | chr2:179433077;179433076;179433075 |
N2AB | 24287 | 73084;73085;73086 | chr2:178568350;178568349;178568348 | chr2:179433077;179433076;179433075 |
N2A | 23360 | 70303;70304;70305 | chr2:178568350;178568349;178568348 | chr2:179433077;179433076;179433075 |
N2B | 16863 | 50812;50813;50814 | chr2:178568350;178568349;178568348 | chr2:179433077;179433076;179433075 |
Novex-1 | 16988 | 51187;51188;51189 | chr2:178568350;178568349;178568348 | chr2:179433077;179433076;179433075 |
Novex-2 | 17055 | 51388;51389;51390 | chr2:178568350;178568349;178568348 | chr2:179433077;179433076;179433075 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.067 | N | 0.303 | 0.121 | 0.388653054685 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9092 | likely_pathogenic | 0.9415 | pathogenic | -2.462 | Highly Destabilizing | 0.958 | D | 0.622 | neutral | D | 0.539831418 | None | None | N |
V/C | 0.9692 | likely_pathogenic | 0.9771 | pathogenic | -1.848 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/D | 0.9994 | likely_pathogenic | 0.9997 | pathogenic | -3.438 | Highly Destabilizing | 0.998 | D | 0.889 | deleterious | D | 0.563304498 | None | None | N |
V/E | 0.9976 | likely_pathogenic | 0.9984 | pathogenic | -3.097 | Highly Destabilizing | 0.998 | D | 0.876 | deleterious | None | None | None | None | N |
V/F | 0.9012 | likely_pathogenic | 0.9377 | pathogenic | -1.438 | Destabilizing | 0.988 | D | 0.839 | deleterious | D | 0.563051008 | None | None | N |
V/G | 0.977 | likely_pathogenic | 0.9841 | pathogenic | -3.099 | Highly Destabilizing | 0.994 | D | 0.885 | deleterious | D | 0.563304498 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9994 | pathogenic | -3.014 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/I | 0.0757 | likely_benign | 0.0808 | benign | -0.598 | Destabilizing | 0.067 | N | 0.303 | neutral | N | 0.484699876 | None | None | N |
V/K | 0.998 | likely_pathogenic | 0.9987 | pathogenic | -2.134 | Highly Destabilizing | 0.995 | D | 0.877 | deleterious | None | None | None | None | N |
V/L | 0.4046 | ambiguous | 0.4759 | ambiguous | -0.598 | Destabilizing | 0.618 | D | 0.572 | neutral | N | 0.487726564 | None | None | N |
V/M | 0.7387 | likely_pathogenic | 0.8124 | pathogenic | -0.793 | Destabilizing | 0.991 | D | 0.759 | deleterious | None | None | None | None | N |
V/N | 0.9976 | likely_pathogenic | 0.9987 | pathogenic | -2.897 | Highly Destabilizing | 0.998 | D | 0.898 | deleterious | None | None | None | None | N |
V/P | 0.9974 | likely_pathogenic | 0.9984 | pathogenic | -1.201 | Destabilizing | 0.998 | D | 0.887 | deleterious | None | None | None | None | N |
V/Q | 0.9964 | likely_pathogenic | 0.9976 | pathogenic | -2.486 | Highly Destabilizing | 0.998 | D | 0.907 | deleterious | None | None | None | None | N |
V/R | 0.9956 | likely_pathogenic | 0.9969 | pathogenic | -2.267 | Highly Destabilizing | 0.998 | D | 0.904 | deleterious | None | None | None | None | N |
V/S | 0.9867 | likely_pathogenic | 0.9919 | pathogenic | -3.406 | Highly Destabilizing | 0.995 | D | 0.879 | deleterious | None | None | None | None | N |
V/T | 0.9449 | likely_pathogenic | 0.9631 | pathogenic | -2.894 | Highly Destabilizing | 0.968 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/W | 0.999 | likely_pathogenic | 0.9994 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/Y | 0.9948 | likely_pathogenic | 0.997 | pathogenic | -1.683 | Destabilizing | 0.995 | D | 0.842 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.