Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25935 | 78028;78029;78030 | chr2:178568329;178568328;178568327 | chr2:179433056;179433055;179433054 |
N2AB | 24294 | 73105;73106;73107 | chr2:178568329;178568328;178568327 | chr2:179433056;179433055;179433054 |
N2A | 23367 | 70324;70325;70326 | chr2:178568329;178568328;178568327 | chr2:179433056;179433055;179433054 |
N2B | 16870 | 50833;50834;50835 | chr2:178568329;178568328;178568327 | chr2:179433056;179433055;179433054 |
Novex-1 | 16995 | 51208;51209;51210 | chr2:178568329;178568328;178568327 | chr2:179433056;179433055;179433054 |
Novex-2 | 17062 | 51409;51410;51411 | chr2:178568329;178568328;178568327 | chr2:179433056;179433055;179433054 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.006 | N | 0.299 | 0.128 | 0.110078149338 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1083 | likely_benign | 0.1333 | benign | -0.489 | Destabilizing | 0.273 | N | 0.361 | neutral | N | 0.499741112 | None | None | N |
T/C | 0.5538 | ambiguous | 0.6213 | pathogenic | -0.178 | Destabilizing | 0.985 | D | 0.385 | neutral | None | None | None | None | N |
T/D | 0.6458 | likely_pathogenic | 0.7247 | pathogenic | -0.03 | Destabilizing | 0.894 | D | 0.326 | neutral | None | None | None | None | N |
T/E | 0.5933 | likely_pathogenic | 0.6701 | pathogenic | -0.118 | Destabilizing | 0.809 | D | 0.322 | neutral | None | None | None | None | N |
T/F | 0.6357 | likely_pathogenic | 0.7376 | pathogenic | -1.032 | Destabilizing | 0.894 | D | 0.47 | neutral | None | None | None | None | N |
T/G | 0.2272 | likely_benign | 0.2715 | benign | -0.604 | Destabilizing | 0.547 | D | 0.375 | neutral | None | None | None | None | N |
T/H | 0.4499 | ambiguous | 0.5206 | ambiguous | -0.987 | Destabilizing | 0.985 | D | 0.503 | neutral | None | None | None | None | N |
T/I | 0.6263 | likely_pathogenic | 0.7279 | pathogenic | -0.302 | Destabilizing | 0.013 | N | 0.245 | neutral | N | 0.496767648 | None | None | N |
T/K | 0.3896 | ambiguous | 0.4189 | ambiguous | -0.38 | Destabilizing | 0.809 | D | 0.327 | neutral | None | None | None | None | N |
T/L | 0.2304 | likely_benign | 0.2858 | benign | -0.302 | Destabilizing | 0.293 | N | 0.327 | neutral | None | None | None | None | N |
T/M | 0.1489 | likely_benign | 0.1879 | benign | 0.115 | Stabilizing | 0.97 | D | 0.345 | neutral | None | None | None | None | N |
T/N | 0.1792 | likely_benign | 0.2173 | benign | -0.115 | Destabilizing | 0.761 | D | 0.31 | neutral | N | 0.515190567 | None | None | N |
T/P | 0.811 | likely_pathogenic | 0.8905 | pathogenic | -0.338 | Destabilizing | 0.928 | D | 0.337 | neutral | N | 0.475118221 | None | None | N |
T/Q | 0.3581 | ambiguous | 0.4121 | ambiguous | -0.432 | Destabilizing | 0.894 | D | 0.325 | neutral | None | None | None | None | N |
T/R | 0.3654 | ambiguous | 0.4078 | ambiguous | -0.072 | Destabilizing | 0.894 | D | 0.327 | neutral | None | None | None | None | N |
T/S | 0.0992 | likely_benign | 0.1145 | benign | -0.326 | Destabilizing | 0.006 | N | 0.299 | neutral | N | 0.421240256 | None | None | N |
T/V | 0.3812 | ambiguous | 0.4525 | ambiguous | -0.338 | Destabilizing | 0.293 | N | 0.332 | neutral | None | None | None | None | N |
T/W | 0.894 | likely_pathogenic | 0.9305 | pathogenic | -0.997 | Destabilizing | 0.995 | D | 0.585 | neutral | None | None | None | None | N |
T/Y | 0.6106 | likely_pathogenic | 0.7022 | pathogenic | -0.728 | Destabilizing | 0.945 | D | 0.482 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.