Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25960 | 78103;78104;78105 | chr2:178568254;178568253;178568252 | chr2:179432981;179432980;179432979 |
N2AB | 24319 | 73180;73181;73182 | chr2:178568254;178568253;178568252 | chr2:179432981;179432980;179432979 |
N2A | 23392 | 70399;70400;70401 | chr2:178568254;178568253;178568252 | chr2:179432981;179432980;179432979 |
N2B | 16895 | 50908;50909;50910 | chr2:178568254;178568253;178568252 | chr2:179432981;179432980;179432979 |
Novex-1 | 17020 | 51283;51284;51285 | chr2:178568254;178568253;178568252 | chr2:179432981;179432980;179432979 |
Novex-2 | 17087 | 51484;51485;51486 | chr2:178568254;178568253;178568252 | chr2:179432981;179432980;179432979 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs367624488 | -0.73 | 0.958 | N | 0.554 | 0.382 | None | gnomAD-2.1.1 | 8.57E-05 | None | None | None | None | N | None | 9.51042E-04 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs367624488 | -0.73 | 0.958 | N | 0.554 | 0.382 | None | gnomAD-3.1.2 | 2.56505E-04 | None | None | None | None | N | None | 9.17786E-04 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs367624488 | -0.73 | 0.958 | N | 0.554 | 0.382 | None | gnomAD-4.0.0 | 4.95855E-05 | None | None | None | None | N | None | 1.02861E-03 | 5.00334E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2594 | likely_benign | 0.2747 | benign | -1.063 | Destabilizing | 0.958 | D | 0.665 | neutral | N | 0.480638403 | None | None | N |
E/C | 0.9295 | likely_pathogenic | 0.924 | pathogenic | -0.582 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/D | 0.6225 | likely_pathogenic | 0.579 | pathogenic | -1.257 | Destabilizing | 0.067 | N | 0.213 | neutral | N | 0.468775118 | None | None | N |
E/F | 0.9584 | likely_pathogenic | 0.9599 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
E/G | 0.5203 | ambiguous | 0.5524 | ambiguous | -1.444 | Destabilizing | 0.988 | D | 0.755 | deleterious | N | 0.486665564 | None | None | N |
E/H | 0.8559 | likely_pathogenic | 0.8456 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/I | 0.6047 | likely_pathogenic | 0.5869 | pathogenic | -0.014 | Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | N |
E/K | 0.4382 | ambiguous | 0.4946 | ambiguous | -0.895 | Destabilizing | 0.958 | D | 0.554 | neutral | N | 0.473508378 | None | None | N |
E/L | 0.7067 | likely_pathogenic | 0.7152 | pathogenic | -0.014 | Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | N |
E/M | 0.6638 | likely_pathogenic | 0.6572 | pathogenic | 0.556 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/N | 0.6697 | likely_pathogenic | 0.6491 | pathogenic | -1.266 | Destabilizing | 0.982 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/P | 0.7898 | likely_pathogenic | 0.7869 | pathogenic | -0.344 | Destabilizing | 0.995 | D | 0.823 | deleterious | None | None | None | None | N |
E/Q | 0.2382 | likely_benign | 0.2355 | benign | -1.118 | Destabilizing | 0.994 | D | 0.671 | neutral | N | 0.516961436 | None | None | N |
E/R | 0.613 | likely_pathogenic | 0.6276 | pathogenic | -0.704 | Destabilizing | 0.995 | D | 0.749 | deleterious | None | None | None | None | N |
E/S | 0.4149 | ambiguous | 0.4394 | ambiguous | -1.682 | Destabilizing | 0.968 | D | 0.595 | neutral | None | None | None | None | N |
E/T | 0.4275 | ambiguous | 0.4174 | ambiguous | -1.36 | Destabilizing | 0.991 | D | 0.783 | deleterious | None | None | None | None | N |
E/V | 0.3854 | ambiguous | 0.3776 | ambiguous | -0.344 | Destabilizing | 0.994 | D | 0.797 | deleterious | N | 0.521041891 | None | None | N |
E/W | 0.9914 | likely_pathogenic | 0.991 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/Y | 0.9314 | likely_pathogenic | 0.9272 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.