Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25966 | 78121;78122;78123 | chr2:178568236;178568235;178568234 | chr2:179432963;179432962;179432961 |
N2AB | 24325 | 73198;73199;73200 | chr2:178568236;178568235;178568234 | chr2:179432963;179432962;179432961 |
N2A | 23398 | 70417;70418;70419 | chr2:178568236;178568235;178568234 | chr2:179432963;179432962;179432961 |
N2B | 16901 | 50926;50927;50928 | chr2:178568236;178568235;178568234 | chr2:179432963;179432962;179432961 |
Novex-1 | 17026 | 51301;51302;51303 | chr2:178568236;178568235;178568234 | chr2:179432963;179432962;179432961 |
Novex-2 | 17093 | 51502;51503;51504 | chr2:178568236;178568235;178568234 | chr2:179432963;179432962;179432961 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.698 | N | 0.726 | 0.189 | 0.350524144436 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.3823 | ambiguous | 0.38 | ambiguous | -3.447 | Highly Destabilizing | 0.86 | D | 0.694 | prob.neutral | None | None | None | None | N |
F/C | 0.1959 | likely_benign | 0.1802 | benign | -1.971 | Destabilizing | 0.997 | D | 0.752 | deleterious | N | 0.503800138 | None | None | N |
F/D | 0.8857 | likely_pathogenic | 0.8839 | pathogenic | -3.37 | Highly Destabilizing | 0.956 | D | 0.782 | deleterious | None | None | None | None | N |
F/E | 0.8638 | likely_pathogenic | 0.8534 | pathogenic | -3.237 | Highly Destabilizing | 0.956 | D | 0.751 | deleterious | None | None | None | None | N |
F/G | 0.7603 | likely_pathogenic | 0.7678 | pathogenic | -3.805 | Highly Destabilizing | 0.956 | D | 0.747 | deleterious | None | None | None | None | N |
F/H | 0.4445 | ambiguous | 0.4063 | ambiguous | -1.981 | Destabilizing | 0.043 | N | 0.569 | neutral | None | None | None | None | N |
F/I | 0.1862 | likely_benign | 0.153 | benign | -2.278 | Highly Destabilizing | 0.942 | D | 0.733 | prob.delet. | N | 0.467647337 | None | None | N |
F/K | 0.776 | likely_pathogenic | 0.7502 | pathogenic | -2.234 | Highly Destabilizing | 0.956 | D | 0.771 | deleterious | None | None | None | None | N |
F/L | 0.6768 | likely_pathogenic | 0.6452 | pathogenic | -2.278 | Highly Destabilizing | 0.698 | D | 0.726 | prob.delet. | N | 0.496026017 | None | None | N |
F/M | 0.3683 | ambiguous | 0.356 | ambiguous | -1.836 | Destabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | N |
F/N | 0.614 | likely_pathogenic | 0.5939 | pathogenic | -2.439 | Highly Destabilizing | 0.956 | D | 0.782 | deleterious | None | None | None | None | N |
F/P | 0.998 | likely_pathogenic | 0.9977 | pathogenic | -2.677 | Highly Destabilizing | 0.993 | D | 0.808 | deleterious | None | None | None | None | N |
F/Q | 0.6673 | likely_pathogenic | 0.6406 | pathogenic | -2.589 | Highly Destabilizing | 0.956 | D | 0.801 | deleterious | None | None | None | None | N |
F/R | 0.6301 | likely_pathogenic | 0.5872 | pathogenic | -1.365 | Destabilizing | 0.956 | D | 0.789 | deleterious | None | None | None | None | N |
F/S | 0.2473 | likely_benign | 0.2709 | benign | -3.106 | Highly Destabilizing | 0.942 | D | 0.731 | prob.delet. | N | 0.418085308 | None | None | N |
F/T | 0.3274 | likely_benign | 0.3472 | ambiguous | -2.888 | Highly Destabilizing | 0.978 | D | 0.729 | prob.delet. | None | None | None | None | N |
F/V | 0.1758 | likely_benign | 0.1566 | benign | -2.677 | Highly Destabilizing | 0.822 | D | 0.721 | prob.delet. | N | 0.455006113 | None | None | N |
F/W | 0.5177 | ambiguous | 0.4879 | ambiguous | -0.98 | Destabilizing | 0.994 | D | 0.741 | deleterious | None | None | None | None | N |
F/Y | 0.1528 | likely_benign | 0.132 | benign | -1.393 | Destabilizing | 0.006 | N | 0.312 | neutral | N | 0.484000869 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.