Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25970 | 78133;78134;78135 | chr2:178568224;178568223;178568222 | chr2:179432951;179432950;179432949 |
N2AB | 24329 | 73210;73211;73212 | chr2:178568224;178568223;178568222 | chr2:179432951;179432950;179432949 |
N2A | 23402 | 70429;70430;70431 | chr2:178568224;178568223;178568222 | chr2:179432951;179432950;179432949 |
N2B | 16905 | 50938;50939;50940 | chr2:178568224;178568223;178568222 | chr2:179432951;179432950;179432949 |
Novex-1 | 17030 | 51313;51314;51315 | chr2:178568224;178568223;178568222 | chr2:179432951;179432950;179432949 |
Novex-2 | 17097 | 51514;51515;51516 | chr2:178568224;178568223;178568222 | chr2:179432951;179432950;179432949 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1356017017 | 0.281 | 0.873 | N | 0.436 | 0.201 | 0.342865806769 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
R/K | rs1356017017 | 0.281 | 0.873 | N | 0.436 | 0.201 | 0.342865806769 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9817 | likely_pathogenic | 0.9822 | pathogenic | 0.128 | Stabilizing | 0.916 | D | 0.543 | neutral | None | None | None | None | I |
R/C | 0.8774 | likely_pathogenic | 0.8414 | pathogenic | -0.029 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
R/D | 0.9936 | likely_pathogenic | 0.9946 | pathogenic | -0.188 | Destabilizing | 0.996 | D | 0.573 | neutral | None | None | None | None | I |
R/E | 0.9759 | likely_pathogenic | 0.9781 | pathogenic | -0.114 | Destabilizing | 0.957 | D | 0.493 | neutral | None | None | None | None | I |
R/F | 0.9885 | likely_pathogenic | 0.9891 | pathogenic | -0.112 | Destabilizing | 0.975 | D | 0.601 | neutral | None | None | None | None | I |
R/G | 0.9706 | likely_pathogenic | 0.972 | pathogenic | -0.061 | Destabilizing | 0.983 | D | 0.479 | neutral | N | 0.458243917 | None | None | I |
R/H | 0.6987 | likely_pathogenic | 0.6765 | pathogenic | -0.798 | Destabilizing | 0.999 | D | 0.459 | neutral | None | None | None | None | I |
R/I | 0.9341 | likely_pathogenic | 0.9397 | pathogenic | 0.59 | Stabilizing | 0.935 | D | 0.535 | neutral | N | 0.515267925 | None | None | I |
R/K | 0.5501 | ambiguous | 0.4931 | ambiguous | 0.07 | Stabilizing | 0.873 | D | 0.436 | neutral | N | 0.474920026 | None | None | I |
R/L | 0.9278 | likely_pathogenic | 0.929 | pathogenic | 0.59 | Stabilizing | 0.033 | N | 0.523 | neutral | None | None | None | None | I |
R/M | 0.969 | likely_pathogenic | 0.9672 | pathogenic | 0.031 | Stabilizing | 0.975 | D | 0.503 | neutral | None | None | None | None | I |
R/N | 0.986 | likely_pathogenic | 0.9879 | pathogenic | 0.189 | Stabilizing | 0.996 | D | 0.477 | neutral | None | None | None | None | I |
R/P | 0.9792 | likely_pathogenic | 0.98 | pathogenic | 0.457 | Stabilizing | 0.996 | D | 0.566 | neutral | None | None | None | None | I |
R/Q | 0.7002 | likely_pathogenic | 0.667 | pathogenic | 0.173 | Stabilizing | 0.996 | D | 0.484 | neutral | None | None | None | None | I |
R/S | 0.9849 | likely_pathogenic | 0.987 | pathogenic | -0.007 | Destabilizing | 0.983 | D | 0.496 | neutral | N | 0.489273403 | None | None | I |
R/T | 0.9716 | likely_pathogenic | 0.9774 | pathogenic | 0.199 | Stabilizing | 0.892 | D | 0.509 | neutral | N | 0.508685883 | None | None | I |
R/V | 0.9613 | likely_pathogenic | 0.9644 | pathogenic | 0.457 | Stabilizing | 0.845 | D | 0.545 | neutral | None | None | None | None | I |
R/W | 0.8958 | likely_pathogenic | 0.8792 | pathogenic | -0.274 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
R/Y | 0.9548 | likely_pathogenic | 0.9505 | pathogenic | 0.152 | Stabilizing | 0.987 | D | 0.575 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.