Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26001 | 78226;78227;78228 | chr2:178568131;178568130;178568129 | chr2:179432858;179432857;179432856 |
N2AB | 24360 | 73303;73304;73305 | chr2:178568131;178568130;178568129 | chr2:179432858;179432857;179432856 |
N2A | 23433 | 70522;70523;70524 | chr2:178568131;178568130;178568129 | chr2:179432858;179432857;179432856 |
N2B | 16936 | 51031;51032;51033 | chr2:178568131;178568130;178568129 | chr2:179432858;179432857;179432856 |
Novex-1 | 17061 | 51406;51407;51408 | chr2:178568131;178568130;178568129 | chr2:179432858;179432857;179432856 |
Novex-2 | 17128 | 51607;51608;51609 | chr2:178568131;178568130;178568129 | chr2:179432858;179432857;179432856 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs774218394 | 0.123 | None | N | 0.095 | 0.131 | 0.287603790349 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2828 | likely_benign | 0.269 | benign | -0.788 | Destabilizing | 0.824 | D | 0.395 | neutral | None | None | None | None | N |
A/D | 0.1964 | likely_benign | 0.1893 | benign | -0.168 | Destabilizing | 0.062 | N | 0.499 | neutral | N | 0.410177901 | None | None | N |
A/E | 0.1957 | likely_benign | 0.1963 | benign | -0.301 | Destabilizing | 0.001 | N | 0.193 | neutral | None | None | None | None | N |
A/F | 0.1625 | likely_benign | 0.1843 | benign | -0.748 | Destabilizing | 0.38 | N | 0.499 | neutral | None | None | None | None | N |
A/G | 0.111 | likely_benign | 0.1022 | benign | -0.361 | Destabilizing | 0.117 | N | 0.359 | neutral | N | 0.485118377 | None | None | N |
A/H | 0.2725 | likely_benign | 0.27 | benign | -0.375 | Destabilizing | 0.824 | D | 0.447 | neutral | None | None | None | None | N |
A/I | 0.136 | likely_benign | 0.1571 | benign | -0.235 | Destabilizing | 0.001 | N | 0.197 | neutral | None | None | None | None | N |
A/K | 0.3399 | likely_benign | 0.3392 | benign | -0.596 | Destabilizing | 0.081 | N | 0.381 | neutral | None | None | None | None | N |
A/L | 0.1073 | likely_benign | 0.1106 | benign | -0.235 | Destabilizing | 0.035 | N | 0.406 | neutral | None | None | None | None | N |
A/M | 0.1257 | likely_benign | 0.132 | benign | -0.335 | Destabilizing | 0.38 | N | 0.396 | neutral | None | None | None | None | N |
A/N | 0.1291 | likely_benign | 0.1267 | benign | -0.322 | Destabilizing | 0.38 | N | 0.491 | neutral | None | None | None | None | N |
A/P | 0.7192 | likely_pathogenic | 0.7464 | pathogenic | -0.212 | Destabilizing | 0.484 | N | 0.418 | neutral | N | 0.494796652 | None | None | N |
A/Q | 0.2287 | likely_benign | 0.2231 | benign | -0.554 | Destabilizing | 0.235 | N | 0.423 | neutral | None | None | None | None | N |
A/R | 0.3178 | likely_benign | 0.3192 | benign | -0.197 | Destabilizing | 0.38 | N | 0.417 | neutral | None | None | None | None | N |
A/S | 0.0713 | likely_benign | 0.0698 | benign | -0.599 | Destabilizing | 0.005 | N | 0.185 | neutral | N | 0.403617288 | None | None | N |
A/T | 0.0673 | likely_benign | 0.0681 | benign | -0.64 | Destabilizing | 0.001 | N | 0.061 | neutral | N | 0.458433208 | None | None | N |
A/V | 0.088 | likely_benign | 0.0988 | benign | -0.212 | Destabilizing | None | N | 0.095 | neutral | N | 0.508707312 | None | None | N |
A/W | 0.5476 | ambiguous | 0.565 | pathogenic | -0.912 | Destabilizing | 0.935 | D | 0.545 | neutral | None | None | None | None | N |
A/Y | 0.2513 | likely_benign | 0.2582 | benign | -0.547 | Destabilizing | 0.555 | D | 0.492 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.