Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26016 | 78271;78272;78273 | chr2:178568086;178568085;178568084 | chr2:179432813;179432812;179432811 |
N2AB | 24375 | 73348;73349;73350 | chr2:178568086;178568085;178568084 | chr2:179432813;179432812;179432811 |
N2A | 23448 | 70567;70568;70569 | chr2:178568086;178568085;178568084 | chr2:179432813;179432812;179432811 |
N2B | 16951 | 51076;51077;51078 | chr2:178568086;178568085;178568084 | chr2:179432813;179432812;179432811 |
Novex-1 | 17076 | 51451;51452;51453 | chr2:178568086;178568085;178568084 | chr2:179432813;179432812;179432811 |
Novex-2 | 17143 | 51652;51653;51654 | chr2:178568086;178568085;178568084 | chr2:179432813;179432812;179432811 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 0.349 | N | 0.368 | 0.092 | 0.240491677333 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1956 | likely_benign | 0.1778 | benign | -0.407 | Destabilizing | 0.415 | N | 0.455 | neutral | None | None | None | None | I |
N/C | 0.1823 | likely_benign | 0.1722 | benign | 0.379 | Stabilizing | 0.996 | D | 0.565 | neutral | None | None | None | None | I |
N/D | 0.2021 | likely_benign | 0.2065 | benign | -0.026 | Destabilizing | 0.722 | D | 0.407 | neutral | N | 0.44728792 | None | None | I |
N/E | 0.4872 | ambiguous | 0.4927 | ambiguous | -0.061 | Destabilizing | 0.775 | D | 0.376 | neutral | None | None | None | None | I |
N/F | 0.3703 | ambiguous | 0.3656 | ambiguous | -0.78 | Destabilizing | 0.961 | D | 0.585 | neutral | None | None | None | None | I |
N/G | 0.2668 | likely_benign | 0.2612 | benign | -0.584 | Destabilizing | 0.415 | N | 0.399 | neutral | None | None | None | None | I |
N/H | 0.1049 | likely_benign | 0.1002 | benign | -0.685 | Destabilizing | 0.949 | D | 0.407 | neutral | N | 0.490790768 | None | None | I |
N/I | 0.159 | likely_benign | 0.1521 | benign | -0.028 | Destabilizing | 0.949 | D | 0.593 | neutral | N | 0.514763706 | None | None | I |
N/K | 0.4751 | ambiguous | 0.4984 | ambiguous | 0.082 | Stabilizing | 0.565 | D | 0.375 | neutral | N | 0.486942386 | None | None | I |
N/L | 0.1897 | likely_benign | 0.1806 | benign | -0.028 | Destabilizing | 0.775 | D | 0.521 | neutral | None | None | None | None | I |
N/M | 0.2506 | likely_benign | 0.2401 | benign | 0.443 | Stabilizing | 0.996 | D | 0.549 | neutral | None | None | None | None | I |
N/P | 0.8792 | likely_pathogenic | 0.8894 | pathogenic | -0.128 | Destabilizing | 0.961 | D | 0.547 | neutral | None | None | None | None | I |
N/Q | 0.3535 | ambiguous | 0.3424 | ambiguous | -0.407 | Destabilizing | 0.923 | D | 0.378 | neutral | None | None | None | None | I |
N/R | 0.4997 | ambiguous | 0.5217 | ambiguous | 0.13 | Stabilizing | 0.923 | D | 0.363 | neutral | None | None | None | None | I |
N/S | 0.0642 | likely_benign | 0.0625 | benign | -0.14 | Destabilizing | 0.005 | N | 0.071 | neutral | N | 0.437495001 | None | None | I |
N/T | 0.1014 | likely_benign | 0.0895 | benign | -0.032 | Destabilizing | 0.349 | N | 0.368 | neutral | N | 0.51647586 | None | None | I |
N/V | 0.1692 | likely_benign | 0.1627 | benign | -0.128 | Destabilizing | 0.923 | D | 0.507 | neutral | None | None | None | None | I |
N/W | 0.7263 | likely_pathogenic | 0.7462 | pathogenic | -0.741 | Destabilizing | 0.996 | D | 0.677 | prob.neutral | None | None | None | None | I |
N/Y | 0.1448 | likely_benign | 0.1609 | benign | -0.481 | Destabilizing | 0.983 | D | 0.566 | neutral | N | 0.475167955 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.