Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26034 | 78325;78326;78327 | chr2:178568032;178568031;178568030 | chr2:179432759;179432758;179432757 |
N2AB | 24393 | 73402;73403;73404 | chr2:178568032;178568031;178568030 | chr2:179432759;179432758;179432757 |
N2A | 23466 | 70621;70622;70623 | chr2:178568032;178568031;178568030 | chr2:179432759;179432758;179432757 |
N2B | 16969 | 51130;51131;51132 | chr2:178568032;178568031;178568030 | chr2:179432759;179432758;179432757 |
Novex-1 | 17094 | 51505;51506;51507 | chr2:178568032;178568031;178568030 | chr2:179432759;179432758;179432757 |
Novex-2 | 17161 | 51706;51707;51708 | chr2:178568032;178568031;178568030 | chr2:179432759;179432758;179432757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.983 | N | 0.451 | 0.204 | 0.186928172975 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2014 | likely_benign | 0.2558 | benign | -0.345 | Destabilizing | 0.033 | N | 0.278 | neutral | None | None | None | None | N |
S/C | 0.3335 | likely_benign | 0.396 | ambiguous | -0.328 | Destabilizing | 0.995 | D | 0.528 | neutral | N | 0.511300278 | None | None | N |
S/D | 0.967 | likely_pathogenic | 0.9767 | pathogenic | 0.099 | Stabilizing | 0.957 | D | 0.387 | neutral | None | None | None | None | N |
S/E | 0.9808 | likely_pathogenic | 0.986 | pathogenic | 0.017 | Stabilizing | 0.916 | D | 0.355 | neutral | None | None | None | None | N |
S/F | 0.9116 | likely_pathogenic | 0.9403 | pathogenic | -0.813 | Destabilizing | 0.987 | D | 0.565 | neutral | None | None | None | None | N |
S/G | 0.185 | likely_benign | 0.2341 | benign | -0.483 | Destabilizing | 0.805 | D | 0.351 | neutral | N | 0.518228086 | None | None | N |
S/H | 0.9235 | likely_pathogenic | 0.9353 | pathogenic | -0.93 | Destabilizing | 0.999 | D | 0.512 | neutral | None | None | None | None | N |
S/I | 0.9038 | likely_pathogenic | 0.9326 | pathogenic | -0.111 | Destabilizing | 0.967 | D | 0.543 | neutral | N | 0.515655144 | None | None | N |
S/K | 0.9936 | likely_pathogenic | 0.9947 | pathogenic | -0.597 | Destabilizing | 0.916 | D | 0.349 | neutral | None | None | None | None | N |
S/L | 0.5451 | ambiguous | 0.6284 | pathogenic | -0.111 | Destabilizing | 0.845 | D | 0.407 | neutral | None | None | None | None | N |
S/M | 0.6926 | likely_pathogenic | 0.7603 | pathogenic | 0.055 | Stabilizing | 0.999 | D | 0.509 | neutral | None | None | None | None | N |
S/N | 0.6759 | likely_pathogenic | 0.7465 | pathogenic | -0.326 | Destabilizing | 0.983 | D | 0.451 | neutral | N | 0.465706791 | None | None | N |
S/P | 0.993 | likely_pathogenic | 0.9953 | pathogenic | -0.159 | Destabilizing | 0.987 | D | 0.482 | neutral | None | None | None | None | N |
S/Q | 0.9521 | likely_pathogenic | 0.9583 | pathogenic | -0.557 | Destabilizing | 0.987 | D | 0.445 | neutral | None | None | None | None | N |
S/R | 0.9871 | likely_pathogenic | 0.9887 | pathogenic | -0.358 | Destabilizing | 0.983 | D | 0.47 | neutral | N | 0.487636161 | None | None | N |
S/T | 0.2805 | likely_benign | 0.3205 | benign | -0.423 | Destabilizing | 0.892 | D | 0.345 | neutral | N | 0.510744753 | None | None | N |
S/V | 0.8312 | likely_pathogenic | 0.8729 | pathogenic | -0.159 | Destabilizing | 0.95 | D | 0.486 | neutral | None | None | None | None | N |
S/W | 0.9584 | likely_pathogenic | 0.9688 | pathogenic | -0.823 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
S/Y | 0.8777 | likely_pathogenic | 0.9061 | pathogenic | -0.56 | Destabilizing | 0.996 | D | 0.572 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.