Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26070 | 78433;78434;78435 | chr2:178567924;178567923;178567922 | chr2:179432651;179432650;179432649 |
N2AB | 24429 | 73510;73511;73512 | chr2:178567924;178567923;178567922 | chr2:179432651;179432650;179432649 |
N2A | 23502 | 70729;70730;70731 | chr2:178567924;178567923;178567922 | chr2:179432651;179432650;179432649 |
N2B | 17005 | 51238;51239;51240 | chr2:178567924;178567923;178567922 | chr2:179432651;179432650;179432649 |
Novex-1 | 17130 | 51613;51614;51615 | chr2:178567924;178567923;178567922 | chr2:179432651;179432650;179432649 |
Novex-2 | 17197 | 51814;51815;51816 | chr2:178567924;178567923;178567922 | chr2:179432651;179432650;179432649 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 1.0 | N | 0.539 | 0.439 | 0.740325958804 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
I/V | rs765860384 | -0.108 | 0.993 | N | 0.342 | 0.165 | 0.512079609283 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/V | rs765860384 | -0.108 | 0.993 | N | 0.342 | 0.165 | 0.512079609283 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3223 | likely_benign | 0.3596 | ambiguous | -0.539 | Destabilizing | 0.999 | D | 0.494 | neutral | None | None | None | None | I |
I/C | 0.8297 | likely_pathogenic | 0.8471 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | I |
I/D | 0.8977 | likely_pathogenic | 0.9196 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
I/E | 0.8015 | likely_pathogenic | 0.844 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
I/F | 0.3463 | ambiguous | 0.3574 | ambiguous | -0.581 | Destabilizing | 1.0 | D | 0.581 | neutral | N | 0.485750057 | None | None | I |
I/G | 0.8388 | likely_pathogenic | 0.8567 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | I |
I/H | 0.7677 | likely_pathogenic | 0.7976 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
I/K | 0.5751 | likely_pathogenic | 0.612 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | I |
I/L | 0.1479 | likely_benign | 0.1507 | benign | -0.315 | Destabilizing | 0.993 | D | 0.312 | neutral | N | 0.4662819 | None | None | I |
I/M | 0.1193 | likely_benign | 0.122 | benign | -0.494 | Destabilizing | 1.0 | D | 0.567 | neutral | N | 0.469418205 | None | None | I |
I/N | 0.6034 | likely_pathogenic | 0.626 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.645 | neutral | N | 0.513552985 | None | None | I |
I/P | 0.8466 | likely_pathogenic | 0.8482 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
I/Q | 0.6751 | likely_pathogenic | 0.7084 | pathogenic | -0.435 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
I/R | 0.4526 | ambiguous | 0.4906 | ambiguous | 0.171 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
I/S | 0.4724 | ambiguous | 0.4947 | ambiguous | -0.678 | Destabilizing | 1.0 | D | 0.58 | neutral | N | 0.44684799 | None | None | I |
I/T | 0.3374 | likely_benign | 0.3547 | ambiguous | -0.66 | Destabilizing | 1.0 | D | 0.539 | neutral | N | 0.502085197 | None | None | I |
I/V | 0.0938 | likely_benign | 0.0969 | benign | -0.358 | Destabilizing | 0.993 | D | 0.342 | neutral | N | 0.495313941 | None | None | I |
I/W | 0.912 | likely_pathogenic | 0.9259 | pathogenic | -0.594 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
I/Y | 0.7495 | likely_pathogenic | 0.7767 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.58 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.