Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26079 | 78460;78461;78462 | chr2:178567897;178567896;178567895 | chr2:179432624;179432623;179432622 |
N2AB | 24438 | 73537;73538;73539 | chr2:178567897;178567896;178567895 | chr2:179432624;179432623;179432622 |
N2A | 23511 | 70756;70757;70758 | chr2:178567897;178567896;178567895 | chr2:179432624;179432623;179432622 |
N2B | 17014 | 51265;51266;51267 | chr2:178567897;178567896;178567895 | chr2:179432624;179432623;179432622 |
Novex-1 | 17139 | 51640;51641;51642 | chr2:178567897;178567896;178567895 | chr2:179432624;179432623;179432622 |
Novex-2 | 17206 | 51841;51842;51843 | chr2:178567897;178567896;178567895 | chr2:179432624;179432623;179432622 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs1331149411 | None | 0.412 | N | 0.453 | 0.082 | 0.229924730088 | gnomAD-4.0.0 | 1.36859E-06 | None | None | None | None | N | None | 0 | 2.23614E-05 | None | 0 | 0 | None | 0 | 0 | 8.99588E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.097 | likely_benign | 0.0986 | benign | -1.069 | Destabilizing | None | N | 0.503 | neutral | None | None | None | None | N |
N/C | 0.1428 | likely_benign | 0.1477 | benign | -0.126 | Destabilizing | 0.482 | N | 0.67 | prob.neutral | None | None | None | None | N |
N/D | 0.2421 | likely_benign | 0.257 | benign | -0.332 | Destabilizing | 0.039 | N | 0.307 | neutral | N | 0.474839881 | None | None | N |
N/E | 0.3782 | ambiguous | 0.3858 | ambiguous | -0.268 | Destabilizing | 0.026 | N | 0.293 | neutral | None | None | None | None | N |
N/F | 0.345 | ambiguous | 0.3531 | ambiguous | -0.9 | Destabilizing | 0.482 | N | 0.758 | deleterious | None | None | None | None | N |
N/G | 0.2042 | likely_benign | 0.2177 | benign | -1.372 | Destabilizing | 0.012 | N | 0.411 | neutral | None | None | None | None | N |
N/H | 0.1347 | likely_benign | 0.1406 | benign | -0.991 | Destabilizing | 0.412 | N | 0.453 | neutral | N | 0.463969526 | None | None | N |
N/I | 0.0617 | likely_benign | 0.0586 | benign | -0.307 | Destabilizing | 0.02 | N | 0.619 | neutral | N | 0.374598316 | None | None | N |
N/K | 0.2886 | likely_benign | 0.3037 | benign | -0.278 | Destabilizing | 0.02 | N | 0.289 | neutral | N | 0.463449451 | None | None | N |
N/L | 0.1024 | likely_benign | 0.0977 | benign | -0.307 | Destabilizing | 0.012 | N | 0.633 | neutral | None | None | None | None | N |
N/M | 0.1567 | likely_benign | 0.1541 | benign | 0.162 | Stabilizing | 0.482 | N | 0.622 | neutral | None | None | None | None | N |
N/P | 0.1187 | likely_benign | 0.1148 | benign | -0.533 | Destabilizing | 0.209 | N | 0.621 | neutral | None | None | None | None | N |
N/Q | 0.2698 | likely_benign | 0.2825 | benign | -0.911 | Destabilizing | 0.116 | N | 0.493 | neutral | None | None | None | None | N |
N/R | 0.3516 | ambiguous | 0.374 | ambiguous | -0.17 | Destabilizing | 0.116 | N | 0.463 | neutral | None | None | None | None | N |
N/S | 0.0761 | likely_benign | 0.0787 | benign | -0.901 | Destabilizing | None | N | 0.304 | neutral | N | 0.388143616 | None | None | N |
N/T | 0.0707 | likely_benign | 0.0706 | benign | -0.645 | Destabilizing | None | N | 0.235 | neutral | N | 0.364536038 | None | None | N |
N/V | 0.0614 | likely_benign | 0.06 | benign | -0.533 | Destabilizing | None | N | 0.479 | neutral | None | None | None | None | N |
N/W | 0.7182 | likely_pathogenic | 0.7266 | pathogenic | -0.594 | Destabilizing | 0.914 | D | 0.726 | deleterious | None | None | None | None | N |
N/Y | 0.1425 | likely_benign | 0.1487 | benign | -0.436 | Destabilizing | 0.412 | N | 0.685 | prob.delet. | N | 0.493252283 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.