Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26114 | 78565;78566;78567 | chr2:178567792;178567791;178567790 | chr2:179432519;179432518;179432517 |
N2AB | 24473 | 73642;73643;73644 | chr2:178567792;178567791;178567790 | chr2:179432519;179432518;179432517 |
N2A | 23546 | 70861;70862;70863 | chr2:178567792;178567791;178567790 | chr2:179432519;179432518;179432517 |
N2B | 17049 | 51370;51371;51372 | chr2:178567792;178567791;178567790 | chr2:179432519;179432518;179432517 |
Novex-1 | 17174 | 51745;51746;51747 | chr2:178567792;178567791;178567790 | chr2:179432519;179432518;179432517 |
Novex-2 | 17241 | 51946;51947;51948 | chr2:178567792;178567791;178567790 | chr2:179432519;179432518;179432517 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.687 | 0.465 | 0.372087925617 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77439E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8191 | likely_pathogenic | 0.7424 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | I |
Y/C | 0.3369 | likely_benign | 0.2448 | benign | 0.174 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.499507493 | None | None | I |
Y/D | 0.7008 | likely_pathogenic | 0.5955 | pathogenic | 0.717 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.476348886 | None | None | I |
Y/E | 0.9128 | likely_pathogenic | 0.857 | pathogenic | 0.686 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
Y/F | 0.1404 | likely_benign | 0.1231 | benign | -0.598 | Destabilizing | 0.999 | D | 0.525 | neutral | N | 0.492550489 | None | None | I |
Y/G | 0.6705 | likely_pathogenic | 0.596 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
Y/H | 0.3862 | ambiguous | 0.3192 | benign | 0.039 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.500169895 | None | None | I |
Y/I | 0.8694 | likely_pathogenic | 0.7948 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
Y/K | 0.8772 | likely_pathogenic | 0.8325 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
Y/L | 0.7842 | likely_pathogenic | 0.72 | pathogenic | -0.404 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | I |
Y/M | 0.8534 | likely_pathogenic | 0.7954 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
Y/N | 0.2911 | likely_benign | 0.2144 | benign | 0.089 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.475772883 | None | None | I |
Y/P | 0.9899 | likely_pathogenic | 0.9851 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
Y/Q | 0.8217 | likely_pathogenic | 0.7546 | pathogenic | 0.046 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
Y/R | 0.6959 | likely_pathogenic | 0.6348 | pathogenic | 0.565 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
Y/S | 0.4371 | ambiguous | 0.3385 | benign | -0.368 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.494473287 | None | None | I |
Y/T | 0.7622 | likely_pathogenic | 0.6829 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
Y/V | 0.7833 | likely_pathogenic | 0.6907 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
Y/W | 0.6462 | likely_pathogenic | 0.6069 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.