Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26125 | 78598;78599;78600 | chr2:178567759;178567758;178567757 | chr2:179432486;179432485;179432484 |
N2AB | 24484 | 73675;73676;73677 | chr2:178567759;178567758;178567757 | chr2:179432486;179432485;179432484 |
N2A | 23557 | 70894;70895;70896 | chr2:178567759;178567758;178567757 | chr2:179432486;179432485;179432484 |
N2B | 17060 | 51403;51404;51405 | chr2:178567759;178567758;178567757 | chr2:179432486;179432485;179432484 |
Novex-1 | 17185 | 51778;51779;51780 | chr2:178567759;178567758;178567757 | chr2:179432486;179432485;179432484 |
Novex-2 | 17252 | 51979;51980;51981 | chr2:178567759;178567758;178567757 | chr2:179432486;179432485;179432484 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1213696680 | None | 0.004 | N | 0.297 | 0.088 | 0.386721274199 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1213696680 | None | 0.004 | N | 0.297 | 0.088 | 0.386721274199 | gnomAD-4.0.0 | 1.31492E-05 | None | None | None | None | N | None | 4.82486E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9279 | likely_pathogenic | 0.9011 | pathogenic | -2.212 | Highly Destabilizing | 0.581 | D | 0.641 | neutral | D | 0.532754301 | None | None | N |
V/C | 0.9882 | likely_pathogenic | 0.9872 | pathogenic | -1.377 | Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
V/D | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -3.137 | Highly Destabilizing | 0.929 | D | 0.891 | deleterious | None | None | None | None | N |
V/E | 0.998 | likely_pathogenic | 0.9973 | pathogenic | -2.793 | Highly Destabilizing | 0.908 | D | 0.881 | deleterious | D | 0.560012815 | None | None | N |
V/F | 0.9668 | likely_pathogenic | 0.9575 | pathogenic | -1.252 | Destabilizing | 0.866 | D | 0.843 | deleterious | None | None | None | None | N |
V/G | 0.9876 | likely_pathogenic | 0.9832 | pathogenic | -2.84 | Highly Destabilizing | 0.908 | D | 0.885 | deleterious | D | 0.560012815 | None | None | N |
V/H | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -2.829 | Highly Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | None | None | N |
V/I | 0.0898 | likely_benign | 0.0878 | benign | -0.367 | Destabilizing | 0.004 | N | 0.297 | neutral | N | 0.440794383 | None | None | N |
V/K | 0.9984 | likely_pathogenic | 0.998 | pathogenic | -1.721 | Destabilizing | 0.929 | D | 0.881 | deleterious | None | None | None | None | N |
V/L | 0.6996 | likely_pathogenic | 0.6758 | pathogenic | -0.367 | Destabilizing | 0.09 | N | 0.609 | neutral | D | 0.526570715 | None | None | N |
V/M | 0.8569 | likely_pathogenic | 0.8308 | pathogenic | -0.575 | Destabilizing | 0.866 | D | 0.781 | deleterious | None | None | None | None | N |
V/N | 0.9987 | likely_pathogenic | 0.9983 | pathogenic | -2.514 | Highly Destabilizing | 0.976 | D | 0.89 | deleterious | None | None | None | None | N |
V/P | 0.9942 | likely_pathogenic | 0.9933 | pathogenic | -0.966 | Destabilizing | 0.976 | D | 0.887 | deleterious | None | None | None | None | N |
V/Q | 0.998 | likely_pathogenic | 0.9975 | pathogenic | -2.07 | Highly Destabilizing | 0.976 | D | 0.9 | deleterious | None | None | None | None | N |
V/R | 0.9965 | likely_pathogenic | 0.9959 | pathogenic | -2.016 | Highly Destabilizing | 0.929 | D | 0.895 | deleterious | None | None | None | None | N |
V/S | 0.9906 | likely_pathogenic | 0.9878 | pathogenic | -2.961 | Highly Destabilizing | 0.929 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.9295 | likely_pathogenic | 0.9088 | pathogenic | -2.445 | Highly Destabilizing | 0.648 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/W | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -1.774 | Destabilizing | 0.993 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -1.464 | Destabilizing | 0.929 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.