Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26204 | 78835;78836;78837 | chr2:178567522;178567521;178567520 | chr2:179432249;179432248;179432247 |
N2AB | 24563 | 73912;73913;73914 | chr2:178567522;178567521;178567520 | chr2:179432249;179432248;179432247 |
N2A | 23636 | 71131;71132;71133 | chr2:178567522;178567521;178567520 | chr2:179432249;179432248;179432247 |
N2B | 17139 | 51640;51641;51642 | chr2:178567522;178567521;178567520 | chr2:179432249;179432248;179432247 |
Novex-1 | 17264 | 52015;52016;52017 | chr2:178567522;178567521;178567520 | chr2:179432249;179432248;179432247 |
Novex-2 | 17331 | 52216;52217;52218 | chr2:178567522;178567521;178567520 | chr2:179432249;179432248;179432247 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.994 | N | 0.516 | 0.372 | 0.613122972663 | gnomAD-4.0.0 | 2.74056E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60023E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.299 | likely_benign | 0.3391 | benign | -1.069 | Destabilizing | 0.63 | D | 0.43 | neutral | N | 0.493797086 | None | None | I |
V/C | 0.8313 | likely_pathogenic | 0.8271 | pathogenic | -0.758 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | I |
V/D | 0.684 | likely_pathogenic | 0.7655 | pathogenic | -0.706 | Destabilizing | 0.975 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/E | 0.4986 | ambiguous | 0.5625 | ambiguous | -0.743 | Destabilizing | 0.967 | D | 0.595 | neutral | N | 0.487476755 | None | None | I |
V/F | 0.2792 | likely_benign | 0.3172 | benign | -0.868 | Destabilizing | 0.987 | D | 0.593 | neutral | None | None | None | None | I |
V/G | 0.5199 | ambiguous | 0.5839 | pathogenic | -1.331 | Destabilizing | 0.967 | D | 0.6 | neutral | D | 0.529070997 | None | None | I |
V/H | 0.7134 | likely_pathogenic | 0.7551 | pathogenic | -0.838 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
V/I | 0.0754 | likely_benign | 0.0725 | benign | -0.479 | Destabilizing | 0.818 | D | 0.447 | neutral | None | None | None | None | I |
V/K | 0.5684 | likely_pathogenic | 0.6349 | pathogenic | -0.96 | Destabilizing | 0.975 | D | 0.627 | neutral | None | None | None | None | I |
V/L | 0.228 | likely_benign | 0.2481 | benign | -0.479 | Destabilizing | 0.63 | D | 0.447 | neutral | N | 0.496723601 | None | None | I |
V/M | 0.1794 | likely_benign | 0.1886 | benign | -0.398 | Destabilizing | 0.994 | D | 0.516 | neutral | N | 0.494356971 | None | None | I |
V/N | 0.4977 | ambiguous | 0.5365 | ambiguous | -0.732 | Destabilizing | 0.975 | D | 0.694 | prob.neutral | None | None | None | None | I |
V/P | 0.8045 | likely_pathogenic | 0.8329 | pathogenic | -0.639 | Destabilizing | 0.987 | D | 0.668 | neutral | None | None | None | None | I |
V/Q | 0.4899 | ambiguous | 0.528 | ambiguous | -0.907 | Destabilizing | 0.987 | D | 0.671 | neutral | None | None | None | None | I |
V/R | 0.5048 | ambiguous | 0.5777 | pathogenic | -0.434 | Destabilizing | 0.975 | D | 0.705 | prob.neutral | None | None | None | None | I |
V/S | 0.3622 | ambiguous | 0.4046 | ambiguous | -1.209 | Destabilizing | 0.845 | D | 0.508 | neutral | None | None | None | None | I |
V/T | 0.167 | likely_benign | 0.1697 | benign | -1.138 | Destabilizing | 0.014 | N | 0.202 | neutral | None | None | None | None | I |
V/W | 0.8828 | likely_pathogenic | 0.8994 | pathogenic | -1.026 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
V/Y | 0.7113 | likely_pathogenic | 0.743 | pathogenic | -0.733 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.