Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26205 | 78838;78839;78840 | chr2:178567519;178567518;178567517 | chr2:179432246;179432245;179432244 |
N2AB | 24564 | 73915;73916;73917 | chr2:178567519;178567518;178567517 | chr2:179432246;179432245;179432244 |
N2A | 23637 | 71134;71135;71136 | chr2:178567519;178567518;178567517 | chr2:179432246;179432245;179432244 |
N2B | 17140 | 51643;51644;51645 | chr2:178567519;178567518;178567517 | chr2:179432246;179432245;179432244 |
Novex-1 | 17265 | 52018;52019;52020 | chr2:178567519;178567518;178567517 | chr2:179432246;179432245;179432244 |
Novex-2 | 17332 | 52219;52220;52221 | chr2:178567519;178567518;178567517 | chr2:179432246;179432245;179432244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs398124456 | None | 0.939 | D | 0.459 | 0.574 | 0.69793306553 | gnomAD-4.0.0 | 1.59498E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86261E-06 | 0 | 0 |
V/G | None | None | 0.997 | D | 0.687 | 0.821 | 0.928572533926 | gnomAD-4.0.0 | 1.59498E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86261E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5868 | likely_pathogenic | 0.5526 | ambiguous | -1.787 | Destabilizing | 0.939 | D | 0.459 | neutral | D | 0.531638179 | None | None | I |
V/C | 0.8252 | likely_pathogenic | 0.7991 | pathogenic | -1.35 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | I |
V/D | 0.9757 | likely_pathogenic | 0.9763 | pathogenic | -1.972 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | I |
V/E | 0.9136 | likely_pathogenic | 0.9122 | pathogenic | -1.83 | Destabilizing | 0.997 | D | 0.643 | neutral | D | 0.559045899 | None | None | I |
V/F | 0.46 | ambiguous | 0.4708 | ambiguous | -1.115 | Destabilizing | 0.986 | D | 0.626 | neutral | None | None | None | None | I |
V/G | 0.7783 | likely_pathogenic | 0.7642 | pathogenic | -2.261 | Highly Destabilizing | 0.997 | D | 0.687 | prob.neutral | D | 0.538219392 | None | None | I |
V/H | 0.9537 | likely_pathogenic | 0.9527 | pathogenic | -1.98 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
V/I | 0.0846 | likely_benign | 0.0801 | benign | -0.516 | Destabilizing | 0.046 | N | 0.227 | neutral | N | 0.503297421 | None | None | I |
V/K | 0.8799 | likely_pathogenic | 0.8811 | pathogenic | -1.55 | Destabilizing | 0.993 | D | 0.645 | neutral | None | None | None | None | I |
V/L | 0.2718 | likely_benign | 0.2529 | benign | -0.516 | Destabilizing | 0.046 | N | 0.262 | neutral | N | 0.515845495 | None | None | I |
V/M | 0.3155 | likely_benign | 0.3105 | benign | -0.5 | Destabilizing | 0.986 | D | 0.563 | neutral | None | None | None | None | I |
V/N | 0.9257 | likely_pathogenic | 0.9185 | pathogenic | -1.642 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/P | 0.9889 | likely_pathogenic | 0.9885 | pathogenic | -0.908 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | I |
V/Q | 0.8684 | likely_pathogenic | 0.8653 | pathogenic | -1.59 | Destabilizing | 0.998 | D | 0.644 | neutral | None | None | None | None | I |
V/R | 0.8448 | likely_pathogenic | 0.8472 | pathogenic | -1.276 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | I |
V/S | 0.8278 | likely_pathogenic | 0.8095 | pathogenic | -2.263 | Highly Destabilizing | 0.993 | D | 0.628 | neutral | None | None | None | None | I |
V/T | 0.6164 | likely_pathogenic | 0.5951 | pathogenic | -1.985 | Destabilizing | 0.953 | D | 0.557 | neutral | None | None | None | None | I |
V/W | 0.9645 | likely_pathogenic | 0.9619 | pathogenic | -1.544 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | I |
V/Y | 0.8851 | likely_pathogenic | 0.8825 | pathogenic | -1.162 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.