Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26206 | 78841;78842;78843 | chr2:178567516;178567515;178567514 | chr2:179432243;179432242;179432241 |
N2AB | 24565 | 73918;73919;73920 | chr2:178567516;178567515;178567514 | chr2:179432243;179432242;179432241 |
N2A | 23638 | 71137;71138;71139 | chr2:178567516;178567515;178567514 | chr2:179432243;179432242;179432241 |
N2B | 17141 | 51646;51647;51648 | chr2:178567516;178567515;178567514 | chr2:179432243;179432242;179432241 |
Novex-1 | 17266 | 52021;52022;52023 | chr2:178567516;178567515;178567514 | chr2:179432243;179432242;179432241 |
Novex-2 | 17333 | 52222;52223;52224 | chr2:178567516;178567515;178567514 | chr2:179432243;179432242;179432241 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1400612460 | 0.103 | 0.822 | N | 0.442 | 0.23 | 0.184867976434 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.67673E-04 |
N/S | rs1400612460 | 0.103 | 0.822 | N | 0.442 | 0.23 | 0.184867976434 | gnomAD-4.0.0 | 1.59447E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02957E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2105 | likely_benign | 0.241 | benign | -0.403 | Destabilizing | 0.754 | D | 0.557 | neutral | None | None | None | None | I |
N/C | 0.2079 | likely_benign | 0.2086 | benign | 0.247 | Stabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | I |
N/D | 0.2473 | likely_benign | 0.307 | benign | 0.199 | Stabilizing | 0.822 | D | 0.451 | neutral | N | 0.495039874 | None | None | I |
N/E | 0.3886 | ambiguous | 0.4875 | ambiguous | 0.19 | Stabilizing | 0.754 | D | 0.452 | neutral | None | None | None | None | I |
N/F | 0.4462 | ambiguous | 0.4426 | ambiguous | -0.639 | Destabilizing | 0.978 | D | 0.639 | neutral | None | None | None | None | I |
N/G | 0.3065 | likely_benign | 0.3293 | benign | -0.613 | Destabilizing | 0.86 | D | 0.441 | neutral | None | None | None | None | I |
N/H | 0.0646 | likely_benign | 0.0625 | benign | -0.547 | Destabilizing | 0.032 | N | 0.261 | neutral | N | 0.483708159 | None | None | I |
N/I | 0.2271 | likely_benign | 0.2558 | benign | 0.07 | Stabilizing | 0.97 | D | 0.642 | neutral | N | 0.509662609 | None | None | I |
N/K | 0.185 | likely_benign | 0.2424 | benign | 0.06 | Stabilizing | 0.014 | N | 0.252 | neutral | N | 0.415808299 | None | None | I |
N/L | 0.1758 | likely_benign | 0.195 | benign | 0.07 | Stabilizing | 0.956 | D | 0.58 | neutral | None | None | None | None | I |
N/M | 0.2571 | likely_benign | 0.2705 | benign | 0.336 | Stabilizing | 0.998 | D | 0.626 | neutral | None | None | None | None | I |
N/P | 0.477 | ambiguous | 0.4906 | ambiguous | -0.059 | Destabilizing | 0.978 | D | 0.617 | neutral | None | None | None | None | I |
N/Q | 0.2305 | likely_benign | 0.261 | benign | -0.446 | Destabilizing | 0.956 | D | 0.447 | neutral | None | None | None | None | I |
N/R | 0.1976 | likely_benign | 0.2424 | benign | 0.087 | Stabilizing | 0.754 | D | 0.447 | neutral | None | None | None | None | I |
N/S | 0.0909 | likely_benign | 0.0962 | benign | -0.291 | Destabilizing | 0.822 | D | 0.442 | neutral | N | 0.495845163 | None | None | I |
N/T | 0.1313 | likely_benign | 0.1561 | benign | -0.14 | Destabilizing | 0.822 | D | 0.445 | neutral | N | 0.49667467 | None | None | I |
N/V | 0.2105 | likely_benign | 0.2363 | benign | -0.059 | Destabilizing | 0.956 | D | 0.635 | neutral | None | None | None | None | I |
N/W | 0.678 | likely_pathogenic | 0.6714 | pathogenic | -0.572 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | I |
N/Y | 0.1244 | likely_benign | 0.1244 | benign | -0.32 | Destabilizing | 0.942 | D | 0.615 | neutral | D | 0.53227011 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.