Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26230 | 78913;78914;78915 | chr2:178567444;178567443;178567442 | chr2:179432171;179432170;179432169 |
N2AB | 24589 | 73990;73991;73992 | chr2:178567444;178567443;178567442 | chr2:179432171;179432170;179432169 |
N2A | 23662 | 71209;71210;71211 | chr2:178567444;178567443;178567442 | chr2:179432171;179432170;179432169 |
N2B | 17165 | 51718;51719;51720 | chr2:178567444;178567443;178567442 | chr2:179432171;179432170;179432169 |
Novex-1 | 17290 | 52093;52094;52095 | chr2:178567444;178567443;178567442 | chr2:179432171;179432170;179432169 |
Novex-2 | 17357 | 52294;52295;52296 | chr2:178567444;178567443;178567442 | chr2:179432171;179432170;179432169 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 1.0 | N | 0.754 | 0.364 | 0.493021045079 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1993 | likely_benign | 0.1773 | benign | -0.398 | Destabilizing | 1.0 | D | 0.575 | neutral | N | 0.482723071 | None | None | N |
G/C | 0.291 | likely_benign | 0.2362 | benign | -0.831 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
G/D | 0.2059 | likely_benign | 0.1842 | benign | -0.581 | Destabilizing | 0.921 | D | 0.551 | neutral | None | None | None | None | N |
G/E | 0.282 | likely_benign | 0.2535 | benign | -0.687 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.448013065 | None | None | N |
G/F | 0.784 | likely_pathogenic | 0.7249 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/H | 0.5449 | ambiguous | 0.4798 | ambiguous | -0.855 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
G/I | 0.6579 | likely_pathogenic | 0.5679 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
G/K | 0.585 | likely_pathogenic | 0.5421 | ambiguous | -1.059 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/L | 0.6161 | likely_pathogenic | 0.544 | ambiguous | -0.24 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
G/M | 0.6386 | likely_pathogenic | 0.5671 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
G/N | 0.226 | likely_benign | 0.1949 | benign | -0.69 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
G/P | 0.9679 | likely_pathogenic | 0.9522 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
G/Q | 0.4226 | ambiguous | 0.3812 | ambiguous | -0.893 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
G/R | 0.4835 | ambiguous | 0.4419 | ambiguous | -0.702 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.454263763 | None | None | N |
G/S | 0.1505 | likely_benign | 0.1341 | benign | -0.917 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
G/T | 0.4327 | ambiguous | 0.3696 | ambiguous | -0.941 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
G/V | 0.5007 | ambiguous | 0.4162 | ambiguous | -0.253 | Destabilizing | 1.0 | D | 0.754 | deleterious | N | 0.506312007 | None | None | N |
G/W | 0.6115 | likely_pathogenic | 0.5386 | ambiguous | -1.113 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
G/Y | 0.57 | likely_pathogenic | 0.4915 | ambiguous | -0.719 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.