Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26237 | 78934;78935;78936 | chr2:178567423;178567422;178567421 | chr2:179432150;179432149;179432148 |
N2AB | 24596 | 74011;74012;74013 | chr2:178567423;178567422;178567421 | chr2:179432150;179432149;179432148 |
N2A | 23669 | 71230;71231;71232 | chr2:178567423;178567422;178567421 | chr2:179432150;179432149;179432148 |
N2B | 17172 | 51739;51740;51741 | chr2:178567423;178567422;178567421 | chr2:179432150;179432149;179432148 |
Novex-1 | 17297 | 52114;52115;52116 | chr2:178567423;178567422;178567421 | chr2:179432150;179432149;179432148 |
Novex-2 | 17364 | 52315;52316;52317 | chr2:178567423;178567422;178567421 | chr2:179432150;179432149;179432148 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1706305589 | None | 0.901 | N | 0.537 | 0.374 | 0.515430650102 | gnomAD-4.0.0 | 1.60647E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87747E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1311 | likely_benign | 0.1189 | benign | -0.119 | Destabilizing | 0.349 | N | 0.452 | neutral | N | 0.491555985 | None | None | N |
S/C | 0.2105 | likely_benign | 0.172 | benign | -0.237 | Destabilizing | 0.995 | D | 0.406 | neutral | N | 0.502832991 | None | None | N |
S/D | 0.4874 | ambiguous | 0.4253 | ambiguous | -0.08 | Destabilizing | 0.775 | D | 0.436 | neutral | None | None | None | None | N |
S/E | 0.73 | likely_pathogenic | 0.6891 | pathogenic | -0.192 | Destabilizing | 0.775 | D | 0.428 | neutral | None | None | None | None | N |
S/F | 0.4814 | ambiguous | 0.4036 | ambiguous | -0.829 | Destabilizing | 0.901 | D | 0.537 | neutral | N | 0.484475247 | None | None | N |
S/G | 0.0992 | likely_benign | 0.0849 | benign | -0.176 | Destabilizing | 0.775 | D | 0.427 | neutral | None | None | None | None | N |
S/H | 0.5601 | ambiguous | 0.4884 | ambiguous | -0.588 | Destabilizing | 0.996 | D | 0.401 | neutral | None | None | None | None | N |
S/I | 0.3783 | ambiguous | 0.3186 | benign | -0.102 | Destabilizing | 0.633 | D | 0.512 | neutral | None | None | None | None | N |
S/K | 0.7782 | likely_pathogenic | 0.7138 | pathogenic | -0.412 | Destabilizing | 0.775 | D | 0.425 | neutral | None | None | None | None | N |
S/L | 0.175 | likely_benign | 0.146 | benign | -0.102 | Destabilizing | 0.011 | N | 0.301 | neutral | None | None | None | None | N |
S/M | 0.2414 | likely_benign | 0.2056 | benign | 0.003 | Stabilizing | 0.923 | D | 0.391 | neutral | None | None | None | None | N |
S/N | 0.1577 | likely_benign | 0.1309 | benign | -0.086 | Destabilizing | 0.775 | D | 0.478 | neutral | None | None | None | None | N |
S/P | 0.722 | likely_pathogenic | 0.6513 | pathogenic | -0.082 | Destabilizing | 0.949 | D | 0.401 | neutral | N | 0.462483425 | None | None | N |
S/Q | 0.7187 | likely_pathogenic | 0.6606 | pathogenic | -0.349 | Destabilizing | 0.961 | D | 0.402 | neutral | None | None | None | None | N |
S/R | 0.7832 | likely_pathogenic | 0.7211 | pathogenic | -0.154 | Destabilizing | 0.923 | D | 0.397 | neutral | None | None | None | None | N |
S/T | 0.0651 | likely_benign | 0.0607 | benign | -0.187 | Destabilizing | 0.003 | N | 0.209 | neutral | N | 0.432854399 | None | None | N |
S/V | 0.3291 | likely_benign | 0.2775 | benign | -0.082 | Destabilizing | 0.633 | D | 0.47 | neutral | None | None | None | None | N |
S/W | 0.6358 | likely_pathogenic | 0.5672 | pathogenic | -0.912 | Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | N |
S/Y | 0.3956 | ambiguous | 0.3383 | benign | -0.601 | Destabilizing | 0.949 | D | 0.543 | neutral | N | 0.484475247 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.