Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2624 | 8095;8096;8097 | chr2:178771457;178771456;178771455 | chr2:179636184;179636183;179636182 |
N2AB | 2624 | 8095;8096;8097 | chr2:178771457;178771456;178771455 | chr2:179636184;179636183;179636182 |
N2A | 2624 | 8095;8096;8097 | chr2:178771457;178771456;178771455 | chr2:179636184;179636183;179636182 |
N2B | 2578 | 7957;7958;7959 | chr2:178771457;178771456;178771455 | chr2:179636184;179636183;179636182 |
Novex-1 | 2578 | 7957;7958;7959 | chr2:178771457;178771456;178771455 | chr2:179636184;179636183;179636182 |
Novex-2 | 2578 | 7957;7958;7959 | chr2:178771457;178771456;178771455 | chr2:179636184;179636183;179636182 |
Novex-3 | 2624 | 8095;8096;8097 | chr2:178771457;178771456;178771455 | chr2:179636184;179636183;179636182 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.002 | N | 0.133 | 0.128 | 0.119812018005 | gnomAD-4.0.0 | 1.59111E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
K/R | rs1163440648 | None | None | N | 0.138 | 0.124 | 0.207176502487 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1163440648 | None | None | N | 0.138 | 0.124 | 0.207176502487 | gnomAD-4.0.0 | 5.07456E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.02458E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4098 | ambiguous | 0.4284 | ambiguous | -0.182 | Destabilizing | 0.035 | N | 0.355 | neutral | None | None | None | None | N |
K/C | 0.7199 | likely_pathogenic | 0.7112 | pathogenic | -0.279 | Destabilizing | 0.824 | D | 0.429 | neutral | None | None | None | None | N |
K/D | 0.7361 | likely_pathogenic | 0.7601 | pathogenic | -0.13 | Destabilizing | 0.149 | N | 0.404 | neutral | None | None | None | None | N |
K/E | 0.2225 | likely_benign | 0.24 | benign | -0.079 | Destabilizing | 0.027 | N | 0.377 | neutral | N | 0.505749689 | None | None | N |
K/F | 0.723 | likely_pathogenic | 0.7235 | pathogenic | -0.074 | Destabilizing | 0.555 | D | 0.427 | neutral | None | None | None | None | N |
K/G | 0.6014 | likely_pathogenic | 0.6174 | pathogenic | -0.48 | Destabilizing | 0.149 | N | 0.393 | neutral | None | None | None | None | N |
K/H | 0.3088 | likely_benign | 0.3068 | benign | -0.834 | Destabilizing | 0.555 | D | 0.401 | neutral | None | None | None | None | N |
K/I | 0.2792 | likely_benign | 0.2782 | benign | 0.555 | Stabilizing | 0.235 | N | 0.441 | neutral | None | None | None | None | N |
K/L | 0.3413 | ambiguous | 0.3518 | ambiguous | 0.555 | Stabilizing | 0.081 | N | 0.401 | neutral | None | None | None | None | N |
K/M | 0.2453 | likely_benign | 0.2475 | benign | 0.362 | Stabilizing | 0.484 | N | 0.401 | neutral | D | 0.555001522 | None | None | N |
K/N | 0.4345 | ambiguous | 0.4642 | ambiguous | -0.127 | Destabilizing | 0.117 | N | 0.349 | neutral | D | 0.584273782 | None | None | N |
K/P | 0.9644 | likely_pathogenic | 0.9586 | pathogenic | 0.34 | Stabilizing | 0.555 | D | 0.409 | neutral | None | None | None | None | N |
K/Q | 0.1412 | likely_benign | 0.1465 | benign | -0.264 | Destabilizing | 0.002 | N | 0.133 | neutral | N | 0.48099249 | None | None | N |
K/R | 0.0895 | likely_benign | 0.0888 | benign | -0.39 | Destabilizing | None | N | 0.138 | neutral | N | 0.462307258 | None | None | N |
K/S | 0.4587 | ambiguous | 0.4811 | ambiguous | -0.639 | Destabilizing | 0.035 | N | 0.33 | neutral | None | None | None | None | N |
K/T | 0.1826 | likely_benign | 0.1934 | benign | -0.413 | Destabilizing | None | N | 0.284 | neutral | N | 0.507714891 | None | None | N |
K/V | 0.2726 | likely_benign | 0.2766 | benign | 0.34 | Stabilizing | 0.081 | N | 0.419 | neutral | None | None | None | None | N |
K/W | 0.8136 | likely_pathogenic | 0.799 | pathogenic | -0.02 | Destabilizing | 0.935 | D | 0.453 | neutral | None | None | None | None | N |
K/Y | 0.6208 | likely_pathogenic | 0.6197 | pathogenic | 0.281 | Stabilizing | 0.555 | D | 0.427 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.